Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | F3W81_08245 | Q9F7E0 | Positive | 1734658 - 1735326 | 22100.3 |
| methionine--trna ligase | F3W81_08250 | Q5LTL1 | Positive | 1735451 - 1737163 | 64314.1 |
| pas domain s-box protein | F3W81_08255 | P55652 | Negative | 1737310 - 1739934 | 93013.1 |
| hypothetical protein | F3W81_08260 | Not Available | Negative | 1740052 - 1740621 | 20487.0 |
| tetr family transcriptional regulator | F3W81_08265 | P67431 | Positive | 1740853 - 1741467 | 22020.4 |
| zinc-binding dehydrogenase | F3W81_08270 | Q9BV79 | Positive | 1741464 - 1742444 | 33714.8 |
| cytochrome b/b6 domain-containing protein | F3W81_08275 | Not Available | Negative | 1742507 - 1743100 | 21158.2 |
| hamp domain-containing protein | F3W81_08280 | O69729 | Negative | 1743184 - 1744509 | 46792.6 |
| response regulator | F3W81_08285 | Q02540 | Negative | 1744506 - 1745177 | 24755.0 |
| polyamine abc transporter atp-binding protein | F3W81_08290 | Q98HF7 | Positive | 1745592 - 1746671 | 38148.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
