Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | F3W81_08195 | A0R2D4 | Negative | 1724559 - 1725152 | 22222.3 |
| hypothetical protein | F3W81_08200 | Not Available | Negative | 1725398 - 1726105 | 25961.3 |
| duf983 domain-containing protein | F3W81_08205 | Not Available | Positive | 1726344 - 1726757 | 15398.9 |
| dna mismatch repair protein mutt | F3W81_08210 | P91148 | Positive | 1726810 - 1727505 | 24959.7 |
| eama family transporter | F3W81_08215 | Not Available | Negative | 1727508 - 1728395 | 31367.2 |
| fatty acid desaturase | F3W81_08220 | P54972 | Negative | 1728411 - 1729337 | 35329.1 |
| helix-turn-helix domain-containing protein | F3W81_08225 | Not Available | Positive | 1729443 - 1730303 | 32060.6 |
| carnitine 3-dehydrogenase | F3W81_08230 | Q5LTH8 | Negative | 1730300 - 1731718 | 51076.3 |
| aldo/keto reductase | F3W81_08235 | P0A9T4 | Negative | 1731938 - 1732984 | 38872.4 |
| mfs transporter | F3W81_08240 | Q8ZGC3 | Positive | 1733317 - 1734543 | 43272.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
