Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gaf domain-containing protein | F3W81_08145 | Q9R6X3 | Positive | 1714217 - 1716796 | 94327.5 |
| diguanylate cyclase | F3W81_08150 | Q9I310 | Negative | 1716849 - 1717844 | 36987.8 |
| heme no-binding protein | F3W81_08155 | Q86C56 | Negative | 1717952 - 1718539 | 21717.1 |
| methyltransferase | F3W81_08160 | Q24SP7 | Negative | 1718731 - 1720317 | 57508.5 |
| had-ia family hydrolase | F3W81_08165 | Q7NW10 | Negative | 1720424 - 1721116 | 23566.9 |
| marr family transcriptional regulator | F3W81_08170 | P0A4U5 | Positive | 1721254 - 1721712 | 17131.5 |
| duf3572 family protein | F3W81_08175 | Not Available | Negative | 1721709 - 1721993 | 9931.85 |
| diguanylate cyclase | F3W81_08180 | Q9A5I5 | Positive | 1722057 - 1723580 | 54719.2 |
| periplasmic heavy metal sensor | F3W81_08185 | Not Available | Negative | 1723588 - 1724130 | 20284.3 |
| dihydroorotate dehydrogenase | F3W81_08190 | Not Available | Negative | 1724135 - 1724566 | 14936.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
