Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | F3W81_08045 | Not Available | Positive | 1696550 - 1696942 | 14120.8 |
| s49 family peptidase | F3W81_08050 | P03711 | Negative | 1697040 - 1697855 | 28427.8 |
| phage portal protein | F3W81_08055 | Not Available | Negative | 1697747 - 1698496 | 27513.8 |
| hypothetical protein | F3W81_08060 | Not Available | Positive | 1698579 - 1699031 | 16790.6 |
| Trna-his | Not Available | Not Available | Positive | 1699507 - 1699583 | Not Available |
| hypothetical protein | F3W81_08070 | Not Available | Positive | 1699844 - 1700044 | 7207.56 |
| mmcb family dna repair protein | F3W81_08075 | Not Available | Negative | 1700094 - 1700549 | 16884.4 |
| hypothetical protein | F3W81_08080 | Not Available | Positive | 1700749 - 1701948 | 41441.8 |
| hypothetical protein | F3W81_08085 | Not Available | Positive | 1701945 - 1702769 | 29262.5 |
| transcription antitermination factor nusb | F3W81_08090 | Q0APG4 | Negative | 1703250 - 1703747 | 18549.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
