Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | F3W81_07795 | P9WMB8 | Negative | 1640869 - 1641456 | 21697.9 |
| hypothetical protein | F3W81_07800 | Not Available | Positive | 1641563 - 1641841 | 9867.91 |
| homoserine dehydrogenase | F3W81_07805 | P29365 | Positive | 1641950 - 1643236 | 44366.7 |
| single-stranded-dna-specific exonuclease recj | F3W81_07810 | P39693 | Positive | 1643303 - 1645048 | 61407.1 |
| Trna-glu | Not Available | Not Available | Positive | 1645210 - 1645284 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 1645475 - 1645549 | Not Available |
| helix-turn-helix domain-containing protein | F3W81_07825 | O31480 | Negative | 1645639 - 1645962 | 11956.8 |
| mfs transporter | F3W81_07830 | Q8EA87 | Positive | 1646055 - 1647251 | 40976.0 |
| duf1190 domain-containing protein | F3W81_07835 | A8APS2 | Negative | 1647265 - 1647846 | 19558.0 |
| hypothetical protein | F3W81_07840 | P0ADT7 | Negative | 1647867 - 1649093 | 45304.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
