Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromate resistance protein chrb | F3W81_07745 | P17552 | Negative | 1627925 - 1628476 | 21140.1 |
| rna polymerase sigma factor rpod | F3W81_07750 | D5AQI9 | Negative | 1628783 - 1630765 | 75212.2 |
| dna primase | F3W81_07755 | P0ABS6 | Negative | 1630912 - 1632882 | 72208.2 |
| sarcosine oxidase subunit gamma | F3W81_07760 | Not Available | Negative | 1632967 - 1633518 | 19956.3 |
| sarcosine oxidase subunit alpha family protein | F3W81_07765 | O87386 | Negative | 1633511 - 1636444 | 104249.0 |
| sarcosine oxidase subunit delta | F3W81_07770 | O87387 | Negative | 1636441 - 1636695 | 9338.85 |
| sarcosine oxidase subunit beta family protein | F3W81_07775 | O87388 | Negative | 1636718 - 1637971 | 45455.3 |
| hypothetical protein | F3W81_07780 | Not Available | Positive | 1638172 - 1638663 | 18006.7 |
| glutamate dehydrogenase | F3W81_07785 | Q53199 | Negative | 1638670 - 1640100 | 52310.5 |
| hypothetical protein | F3W81_07790 | Not Available | Negative | 1640269 - 1640760 | 17496.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
