Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase | F3W81_07445 | O34980 | Negative | 1553238 - 1554398 | 40703.9 |
| acetylornithine deacetylase | F3W81_07450 | O68873 | Negative | 1554402 - 1555568 | 41845.5 |
| hypothetical protein | F3W81_07455 | Q6D3A9 | Negative | 1555747 - 1557603 | 66239.7 |
| peptide abc transporter substrate-binding protein | F3W81_07460 | P42061 | Positive | 1557878 - 1559584 | 61485.1 |
| abc transporter permease subunit | F3W81_07465 | P42062 | Positive | 1559750 - 1560772 | 38231.8 |
| abc transporter permease subunit | F3W81_07470 | P42063 | Positive | 1560765 - 1561733 | 35080.8 |
| eama family transporter | F3W81_07475 | A0A0H2ZHZ4 | Positive | 1561795 - 1562685 | 30961.7 |
| duf3422 family protein | F3W81_07480 | Not Available | Negative | 1562691 - 1563968 | 47950.0 |
| re/si-specific nad(p)(+) transhydrogenase subunit beta | F3W81_07485 | P43010 | Negative | 1564283 - 1565716 | 50130.8 |
| re/si-specific nad(p)(+) transhydrogenase subunit alpha | F3W81_07490 | Q9ALA2 | Negative | 1565730 - 1567304 | 55564.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
