Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eal domain-containing protein | F3W81_00270 | Q9I310 | Negative | 56441 - 58573 | 78684.3 |
| diguanylate cyclase | F3W81_00275 | P54595 | Positive | 59011 - 60156 | 40923.4 |
| metalloregulator arsr/smtb family transcription factor | F3W81_00280 | P52695 | Negative | 60238 - 60540 | 10895.3 |
| mbl fold metallo-hydrolase | F3W81_00285 | Q87AD6 | Positive | 60714 - 61628 | 33498.5 |
| sulfate permease | F3W81_00290 | Q9FY46 | Positive | 61685 - 63415 | 60926.2 |
| rieske 2fe-2s domain-containing protein | F3W81_00295 | F0KFI5 | Positive | 63574 - 64698 | 42288.5 |
| aldehyde dehydrogenase family protein | F3W81_00300 | Q88RC0 | Negative | 64737 - 66185 | 50879.3 |
| sugar isomerase domain-containing protein | F3W81_00305 | Q9K7N6 | Negative | 66189 - 66956 | 27566.9 |
| uridine phosphorylase | F3W81_00310 | Q5JJC1 | Negative | 66970 - 67740 | 28074.7 |
| carbohydrate kinase family protein | F3W81_00315 | P0A9J7 | Negative | 67733 - 68596 | 29911.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
