Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | F3W81_07145 | A4WU05 | Positive | 1493021 - 1493677 | 24001.1 |
| peptidoglycan dd-metalloendopeptidase family protein | F3W81_07150 | Q46798 | Positive | 1493764 - 1494981 | 41795.5 |
| duf815 domain-containing protein | F3W81_07155 | Not Available | Negative | 1495141 - 1495980 | 30948.8 |
| twin-arginine translocase subunit tatc | F3W81_07160 | D5AT98 | Negative | 1495987 - 1496847 | 31605.9 |
| twin-arginine translocase subunit tatb | F3W81_07165 | Q1GFN7 | Negative | 1496850 - 1497425 | 20396.7 |
| sec-independent protein translocase tata | F3W81_07170 | Q2G9D4 | Negative | 1497432 - 1497647 | 7565.26 |
| atp-binding cassette domain-containing protein | F3W81_07175 | Q6D2F6 | Negative | 1497873 - 1498934 | 39334.6 |
| sdr family nad(p)-dependent oxidoreductase | F3W81_07180 | O67610 | Negative | 1499050 - 1499829 | 26672.0 |
| hypothetical protein | F3W81_07185 | Not Available | Positive | 1499983 - 1501014 | 37435.5 |
| peptide chain release factor 3 | F3W81_07190 | A5G9T7 | Positive | 1501239 - 1502846 | 59828.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
