Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coa transferase | F3W81_00220 | O06543 | Positive | 44006 - 45166 | 40356.3 |
| nitronate monooxygenase | F3W81_00225 | O06179 | Positive | 45163 - 46164 | 35650.5 |
| hypothetical protein | F3W81_00230 | Q315G1 | Positive | 46253 - 47362 | 40431.2 |
| trap transporter small permease subunit | F3W81_00235 | Not Available | Positive | 47438 - 47929 | 18128.0 |
| trap transporter large permease subunit | F3W81_00240 | Q9HU16 | Positive | 47945 - 49285 | 47178.1 |
| amp-binding protein | F3W81_00245 | Q9EY88 | Positive | 49309 - 50835 | 55084.0 |
| hypothetical protein | F3W81_00250 | Not Available | Negative | 50870 - 51676 | 29009.9 |
| c-type cytochrome | F3W81_00255 | Q88FX8 | Positive | 52244 - 53545 | 46469.4 |
| 2fe-2s iron-sulfur cluster binding domain-containing protein | F3W81_00260 | Q51697 | Positive | 53565 - 54038 | 16756.1 |
| molybdopterin-dependent oxidoreductase | F3W81_00265 | P17201 | Positive | 54082 - 56352 | 80506.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
