Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | F3W81_06620 | M1V1V5 | Positive | 1395751 - 1396521 | 26302.0 |
| cadmium-translocating p-type atpase | F3W81_06625 | P9WPS2 | Positive | 1396713 - 1398551 | 62635.8 |
| hypothetical protein | F3W81_06630 | P0AA97 | Positive | 1398955 - 1399491 | 20312.2 |
| eama family transporter | F3W81_06635 | O34416 | Negative | 1399552 - 1400484 | 32704.5 |
| helix-turn-helix domain-containing protein | F3W81_06640 | P9WJW2 | Positive | 1400617 - 1401174 | 20623.9 |
| had hydrolase-like protein | F3W81_06645 | A4QFW4 | Negative | 1401300 - 1402055 | 26458.5 |
| phosphodiesterase | F3W81_06650 | Q6NDI4 | Negative | 1402055 - 1402909 | 31655.7 |
| extracellular solute-binding protein | F3W81_06655 | Q578M8 | Negative | 1402973 - 1404178 | 43890.6 |
| abc transporter permease subunit | F3W81_06660 | Q9KEE9 | Negative | 1404260 - 1405153 | 32518.7 |
| abc transporter permease subunit | F3W81_06665 | O32155 | Negative | 1405150 - 1406127 | 35953.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
