Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrodipicolinate synthase family protein | F3W81_05960 | A0B7E1 | Negative | 1274606 - 1275532 | 33609.8 |
| dioxygenase | F3W81_05965 | Q502D1 | Negative | 1275536 - 1275949 | 15304.3 |
| lysr family transcriptional regulator | F3W81_05970 | P52669 | Positive | 1276042 - 1276917 | 30934.5 |
| glyoxylate/hydroxypyruvate reductase a | F3W81_05975 | A8GD46 | Negative | 1276895 - 1277836 | 33785.6 |
| transporter substrate-binding domain-containing protein | F3W81_05980 | P45024 | Positive | 1278267 - 1279142 | 31021.5 |
| atp-binding cassette domain-containing protein | F3W81_05985 | P27675 | Positive | 1279214 - 1279972 | 27589.9 |
| abc transporter permease subunit | F3W81_05990 | P42399 | Positive | 1279972 - 1280640 | 24612.9 |
| abc transporter permease subunit | F3W81_05995 | P42399 | Positive | 1280650 - 1281321 | 24129.2 |
| n-carbamoyl-d-amino-acid hydrolase | F3W81_06000 | Q44185 | Positive | 1281344 - 1282270 | 34585.2 |
| dihydropyrimidinase | F3W81_06005 | Q8VTT5 | Positive | 1282276 - 1283733 | 52721.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
