Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | F3W81_00120 | Not Available | Negative | 21056 - 21553 | 18320.8 |
| atp-binding cassette domain-containing protein | F3W81_00125 | P08007 | Negative | 21768 - 22766 | 36491.0 |
| oligopeptide abc transporter atp-binding protein oppd | F3W81_00130 | P04285 | Negative | 22763 - 23731 | 35094.8 |
| abc transporter permease subunit | F3W81_00135 | P45053 | Negative | 23731 - 24645 | 32734.7 |
| oligopeptide abc transporter permease oppb | F3W81_00140 | P08005 | Negative | 24647 - 25564 | 33261.5 |
| oligopeptide abc transporter substrate-binding protein oppa | F3W81_00145 | P77348 | Negative | 25640 - 27253 | 60500.2 |
| hypothetical protein | F3W81_00150 | Not Available | Positive | 28122 - 29702 | 59391.9 |
| hypothetical protein | F3W81_00155 | Not Available | Positive | 29705 - 30451 | 27345.2 |
| duf1524 domain-containing protein | F3W81_00160 | D4AK18 | Negative | 30639 - 31346 | 26168.9 |
| tryptophan--trna ligase | F3W81_00165 | Q46127 | Positive | 31773 - 32774 | 36045.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
