Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | F3W81_00070 | Not Available | Positive | 11581 - 12192 | 21841.3 |
| helix-turn-helix domain-containing protein | F3W81_00075 | Q9Z3Q6 | Positive | 12591 - 13631 | 38071.3 |
| hypothetical protein | F3W81_00080 | Not Available | Positive | 13740 - 14711 | 34959.4 |
| hypothetical protein | F3W81_00085 | Not Available | Positive | 14799 - 15533 | 25781.7 |
| vwa domain-containing protein | F3W81_00090 | P70961 | Positive | 15536 - 17809 | 79505.2 |
| hypothetical protein | F3W81_00095 | Not Available | Positive | 17812 - 18546 | 25752.8 |
| marr family transcriptional regulator | F3W81_00100 | P67748 | Negative | 18689 - 19060 | 13588.5 |
| voc family protein | F3W81_00105 | Not Available | Positive | 19116 - 19487 | 12988.3 |
| duf1428 family protein | F3W81_00110 | P0AAQ8 | Negative | 19814 - 20185 | 13701.0 |
| tetr family transcriptional regulator | F3W81_00115 | Q3J6K8 | Positive | 20247 - 20876 | 22697.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
