Pseudomonas lalkuanensis PE08

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Metapseudomonas

Description

Pseudomonas lalkuanensis PE08 is characterized by having a single replicon, which indicates a streamlined genetic structure that may facilitate efficient replication and genetic stability. This bacterium is cataloged under the accession number CP043311.1, ensuring its availability for further research and reference in genomic studies. The specific traits of Pseudomonas lalkuanensis PE08 suggest that it may possess unique functional capabilities that are typical of the Pseudomonas genus, known for a diverse metabolic repertoire. This versatility allows members of this genus to thrive in various environments, including soil and water, and contribute to ecological processes such as nutrient cycling. Understanding the genomic features of Pseudomonas lalkuanensis PE08 can provide insights into its ecological role. The single replicon could indicate adaptations that enhance survival in fluctuating environmental conditions, potentially allowing it to respond rapidly to changes in nutrient availability or stressors. This may position Pseudomonas lalkuanensis PE08 as a significant player in its ecosystem, contributing to microbial diversity and the stability of microbial communities. Further research into its metabolic pathways and interactions with other organisms could reveal its specific contributions to ecological functions, such as decomposition or bioremediation.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusMetapseudomonas
SpeciesMetapseudomonas lalkuanensis
StrainPE08

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas lalkuanensis PE08, Complete Genome

Gene Summary

Adenine Count

1085611 bp

Thymine Count

1080649 bp

Guanine Count

1938452 bp

Cytosine Count

1952241 bp

Genome Length

6056953 bp

Protein-coding Genes

5379 genes

Non-Coding Genes

187 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-oxoadipyl-coa thiolaseFXN65_16330P0C7L2Positive3504945 - 350615042128.8
phenylacetate--coa ligaseFXN65_16335O33469Positive3506249 - 350755949099.0
duf1428 domain-containing proteinFXN65_16340P0AAQ8Positive3507829 - 350818212942.6
type vi secretion system protein tssaFXN65_16345Q9I750Negative3508328 - 350940439822.6
type vi secretion system protein implFXN65_16350Q9I755Negative3509401 - 3513222141125.0
dotu family type iv/vi secretion system proteinFXN65_16355Not AvailableNegative3513219 - 351398928578.0
type vi secretion system baseplate subunit tsskFXN65_16360Q9I753Negative3514008 - 351534247985.0
type vi secretion proteinFXN65_16365Not AvailableNegative3515408 - 351588117749.2
type vi secretion system contractile sheath small subunitFXN65_16370Q9I749Positive3516088 - 351663620409.2
type vi secretion system contractile sheath large subunitFXN65_16375Q9I748Positive3516668 - 351814654815.1

Displaying genes 3271 – 3280 of 5566 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.