Pseudomonas lalkuanensis PE08

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Metapseudomonas

Description

Pseudomonas lalkuanensis PE08 is characterized by having a single replicon, which indicates a streamlined genetic structure that may facilitate efficient replication and genetic stability. This bacterium is cataloged under the accession number CP043311.1, ensuring its availability for further research and reference in genomic studies. The specific traits of Pseudomonas lalkuanensis PE08 suggest that it may possess unique functional capabilities that are typical of the Pseudomonas genus, known for a diverse metabolic repertoire. This versatility allows members of this genus to thrive in various environments, including soil and water, and contribute to ecological processes such as nutrient cycling. Understanding the genomic features of Pseudomonas lalkuanensis PE08 can provide insights into its ecological role. The single replicon could indicate adaptations that enhance survival in fluctuating environmental conditions, potentially allowing it to respond rapidly to changes in nutrient availability or stressors. This may position Pseudomonas lalkuanensis PE08 as a significant player in its ecosystem, contributing to microbial diversity and the stability of microbial communities. Further research into its metabolic pathways and interactions with other organisms could reveal its specific contributions to ecological functions, such as decomposition or bioremediation.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusMetapseudomonas
SpeciesMetapseudomonas lalkuanensis
StrainPE08

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas lalkuanensis PE08, Complete Genome

Gene Summary

Adenine Count

1085611 bp

Thymine Count

1080649 bp

Guanine Count

1938452 bp

Cytosine Count

1952241 bp

Genome Length

6056953 bp

Protein-coding Genes

5379 genes

Non-Coding Genes

187 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methionyl-trna formyltransferaseFXN65_00155Q4KKR0Negative33392 - 3433633243.4
peptide deformylaseFXN65_00160A4XNB3Negative34392 - 3489819315.3
lysm peptidoglycan-binding domain-containing proteinFXN65_00165P54335Positive35040 - 3606537516.0
dna-protecting protein dpraFXN65_00170P43862Positive36149 - 3724338461.2
trna threonylcarbamoyladenosine biosynthesis protein rimnFXN65_00175Q1I2G9Positive37285 - 3783920334.4
nadph:quinone reductaseFXN65_00180P43903Negative37829 - 3880634457.3
oxygen-dependent coproporphyrinogen oxidaseFXN65_00185Q02V57Positive38942 - 3986234787.9
shikimate dehydrogenaseFXN65_00190A4XNB9Positive39859 - 4068629027.8
sulp family inorganic anion transporterFXN65_00195Q9LW86Negative40747 - 4230655324.7
choline abc transporter substrate-binding proteinFXN65_00200Q9L4K3Negative42441 - 4336733141.5

Displaying genes 161 – 170 of 5566 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.