Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Paraburkholderia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Paraburkholderia |
| Species | Paraburkholderia dioscoreae |
| Strain | Msb3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Paraburkholderia dioscoreae Msb3, Complete Genome
Gene Summary
Adenine Count
834166 bp
Thymine Count
836680 bp
Guanine Count
1404984 bp
Cytosine Count
1404167 bp
Genome Length
4479997 bp
Protein-coding Genes
4317 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxyphenylpyruvate dioxygenase | PDMSB3_2303 | Q88JU3 | Positive | 2394349 - 2396232 | 68992.4 |
| conserved exported protein of unknown function | PDMSB3_2304 | Not Available | Positive | 2396423 - 2396755 | 11900.2 |
| conserved protein of unknown function | PDMSB3_2305 | Not Available | Positive | 2396914 - 2397174 | 9195.1 |
| conserved protein of unknown function | PDMSB3_2306 | Not Available | Negative | 2397285 - 2397614 | 12918.4 |
| dna-binding domain-containing protein, arac-type | PDMSB3_2307 | Q46855 | Negative | 2397625 - 2398395 | 28430.3 |
| putative oxidoreductase in 4-hydroxyproline catabolic gene cluster | PDMSB3_2308 | Q59160 | Negative | 2398533 - 2399873 | 46453.8 |
| conserved protein of unknown function | PDMSB3_2309 | G3XD67 | Negative | 2399941 - 2400219 | 9486.52 |
| d-amino-acid oxidase | PDMSB3_2310 | G3XD12 | Negative | 2400209 - 2401339 | 38896.0 |
| 4-hydroxyproline 2-epimerase | PDMSB3_2311 | B4EHE6 | Negative | 2401336 - 2402292 | 33584.9 |
| 1-pyrroline-4-hydroxy-2-carboxylate deaminase | PDMSB3_2312 | A1ATI8 | Positive | 2402643 - 2403548 | 32640.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
