Paraburkholderia dioscoreae Msb3

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Paraburkholderia

Description

Paraburkholderia dioscoreae Msb3 is a rod-shaped bacterium characterized by the presence of flagella, which suggests motility. This species is notable for having five replicons, indicating a complex genome organization that may contribute to its adaptability in various environments. The presence of multiple replicons can provide advantages in terms of genetic diversity and regulation, potentially allowing Paraburkholderia dioscoreae Msb3 to thrive in different ecological niches. This trait may facilitate the bacterium's ability to respond to environmental stresses or to utilize varied substrates, which is often observed in members of the Burkholderia genus. The genetic information for Paraburkholderia dioscoreae Msb3 is cataloged under several accession numbers: LR699553.1, LR699554.1, LR699555.1, LR699556.1, and LR699557.1. These accessions reflect its genomic data, supporting further research into its properties and applications. In terms of ecological insight, the motility conferred by flagella may enhance the bacterium's ability to colonize specific environments, interact with plant root systems, or engage in biogeochemical cycles. Such characteristics could be integral to its role in soil ecosystems or its interactions with host organisms, suggesting potential applications in agriculture or bioremediation efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusParaburkholderia
SpeciesParaburkholderia dioscoreae
StrainMsb3

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraburkholderia dioscoreae Msb3, Complete Genome

Gene Summary

Adenine Count

834166 bp

Thymine Count

836680 bp

Guanine Count

1404984 bp

Cytosine Count

1404167 bp

Genome Length

4479997 bp

Protein-coding Genes

4317 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ferrichrome-iron receptorPDMSB3_2063Q05202Negative2140957 - 214316479106.8
cyanate transport protein cynxPDMSB3_2064P17583Positive2143517 - 214475842520.4
response regulator nastPDMSB3_2065P9WGM2Positive2144938 - 214551321101.7
nitrate abc transporter, nitrate-binding proteinPDMSB3_2066P73450Positive2145524 - 214668141569.7
signal transduction histidine kinasePDMSB3_2067Q9HV31Negative2146700 - 214811851714.5
dna-binding response regulator in two-component regulatory system with qsecPDMSB3_2068E1WA34Negative2148115 - 214878624728.0
abc-type fe3+ transport system, periplasmic componentPDMSB3_2069P43951Positive2148926 - 215001439793.6
abc fe3+ siderophore transporter, inner membrane subunitPDMSB3_2070Q57341Positive2150118 - 215188763569.4
fe(3+) ions import atp-binding protein fbpcPDMSB3_2071Q2K8C8Positive2151880 - 215294738885.5
exported protein of unknown functionPDMSB3_2072Q04064Positive2153002 - 215350817564.2

Displaying genes 6501 – 6510 of 8285 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.