Paraburkholderia dioscoreae Msb3

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Paraburkholderia

Description

Paraburkholderia dioscoreae Msb3 is a rod-shaped bacterium characterized by the presence of flagella, which suggests motility. This species is notable for having five replicons, indicating a complex genome organization that may contribute to its adaptability in various environments. The presence of multiple replicons can provide advantages in terms of genetic diversity and regulation, potentially allowing Paraburkholderia dioscoreae Msb3 to thrive in different ecological niches. This trait may facilitate the bacterium's ability to respond to environmental stresses or to utilize varied substrates, which is often observed in members of the Burkholderia genus. The genetic information for Paraburkholderia dioscoreae Msb3 is cataloged under several accession numbers: LR699553.1, LR699554.1, LR699555.1, LR699556.1, and LR699557.1. These accessions reflect its genomic data, supporting further research into its properties and applications. In terms of ecological insight, the motility conferred by flagella may enhance the bacterium's ability to colonize specific environments, interact with plant root systems, or engage in biogeochemical cycles. Such characteristics could be integral to its role in soil ecosystems or its interactions with host organisms, suggesting potential applications in agriculture or bioremediation efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusParaburkholderia
SpeciesParaburkholderia dioscoreae
StrainMsb3

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraburkholderia dioscoreae Msb3, Complete Genome

Gene Summary

Adenine Count

834166 bp

Thymine Count

836680 bp

Guanine Count

1404984 bp

Cytosine Count

1404167 bp

Genome Length

4479997 bp

Protein-coding Genes

4317 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulatorPDMSB3_1693P37641Negative1741406 - 174231133430.5
putative uncharacterized oxidoreductase mexam1_meta1p0182PDMSB3_1694A0A0B4FP77Negative1742424 - 174319726850.9
penicillin-binding protein, beta-lactamase class cPDMSB3_1695A1IHE7Positive1743536 - 174471142124.3
protein of unknown functionPDMSB3_1696Not AvailableNegative1744654 - 17447854682.59
conserved exported protein of unknown functionPDMSB3_1697Not AvailablePositive1744865 - 174584535867.0
deoxyribose operon repressor, deor familyPDMSB3_1698P0ACK7Positive1745992 - 174671726465.9
permease component of ribose/xylose/arabinose/galactoside abc-type transporterPDMSB3_1699A7FMJ8Negative1746799 - 174785737475.0
predicted l-rhamnose abc transporter, atp-binding componentPDMSB3_1700A0K6Q0Negative1747873 - 174948357920.9
abc-type sugar transport system, periplasmic componentPDMSB3_1701Q5PJE4Negative1749528 - 175053235401.6
permease component of ribose/xylose/arabinose/galactoside abc-type transporterPDMSB3_1702P0AGI3Negative1750629 - 175167536297.3

Displaying genes 6131 – 6140 of 8285 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.