Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Paraburkholderia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Paraburkholderia |
| Species | Paraburkholderia dioscoreae |
| Strain | Msb3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Paraburkholderia dioscoreae Msb3, Complete Genome
Gene Summary
Adenine Count
834166 bp
Thymine Count
836680 bp
Guanine Count
1404984 bp
Cytosine Count
1404167 bp
Genome Length
4479997 bp
Protein-coding Genes
4317 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative 4-hydroxyproline 2-epimerase | PDMSB3_1683 | Q92WS1 | Negative | 1730356 - 1731354 | 36213.6 |
| alpha-ketoglutaric semialdehyde dehydrogenase | PDMSB3_1684 | P42236 | Negative | 1731437 - 1732870 | 50824.0 |
| 1-pyrroline-4-hydroxy-2-carboxylate deaminase | PDMSB3_1685 | A0B7E1 | Negative | 1733056 - 1733958 | 32851.8 |
| glycine/d-amino acid oxidase, deaminating | PDMSB3_1686 | A1JQN9 | Negative | 1734033 - 1735307 | 46128.3 |
| conserved protein of unknown function | PDMSB3_1687 | Not Available | Negative | 1735562 - 1736107 | 19974.8 |
| niacin transporter niap | PDMSB3_1688 | O34691 | Negative | 1736122 - 1737528 | 50944.8 |
| protein of unknown function | PDMSB3_1689 | Not Available | Positive | 1737551 - 1737640 | 3537.2 |
| outer membrane protein (porin) | PDMSB3_1690 | Q04064 | Negative | 1737730 - 1738869 | 39896.6 |
| conserved protein of unknown function | PDMSB3_1691 | Not Available | Positive | 1738910 - 1739218 | 11219.6 |
| diguanylate cyclase (ggdef) domain-containing protein | PDMSB3_1692 | Q9ABX9 | Positive | 1739437 - 1741440 | 72555.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
