Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Paraburkholderia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Paraburkholderia |
| Species | Paraburkholderia dioscoreae |
| Strain | Msb3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Paraburkholderia dioscoreae Msb3, Complete Genome
Gene Summary
Adenine Count
834166 bp
Thymine Count
836680 bp
Guanine Count
1404984 bp
Cytosine Count
1404167 bp
Genome Length
4479997 bp
Protein-coding Genes
4317 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type spermidine/putrescine transport system, permease component ii | PDMSB3_1603 | P45169 | Positive | 1664211 - 1665005 | 28773.2 |
| regulator with hipb | PDMSB3_1604 | P23874 | Negative | 1665092 - 1666441 | 49989.6 |
| dna-directed rna polymerase specialized sigma subunit | PDMSB3_1605 | Q37906 | Negative | 1666444 - 1666707 | 9650.71 |
| 5-(hydroxymethyl)furfural oxidase | PDMSB3_1606 | E4QP00 | Negative | 1666841 - 1668538 | 60370.1 |
| spermidine/putrescine-binding periplasmic protein | PDMSB3_1607 | Q9I6R6 | Negative | 1668656 - 1669714 | 38628.3 |
| dna-binding domain-containing protein, arac-type | PDMSB3_1608 | O34901 | Negative | 1669836 - 1670228 | 14191.0 |
| protein of unknown function | PDMSB3_1609 | Not Available | Negative | 1670225 - 1670395 | 6035.28 |
| histone acetyltransferase hpa2 and related acetyltransferases | PDMSB3_1610 | O06743 | Positive | 1670608 - 1671480 | 30991.3 |
| d-3-phosphoglycerate dehydrogenase | PDMSB3_1611 | A1JRR3 | Positive | 1671486 - 1672412 | 34001.1 |
| putrescine--pyruvate aminotransferase | PDMSB3_1612 | Q9I6J2 | Positive | 1672615 - 1674012 | 49532.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
