Paraburkholderia dioscoreae Msb3

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Paraburkholderia

Description

Paraburkholderia dioscoreae Msb3 is a rod-shaped bacterium characterized by the presence of flagella, which suggests motility. This species is notable for having five replicons, indicating a complex genome organization that may contribute to its adaptability in various environments. The presence of multiple replicons can provide advantages in terms of genetic diversity and regulation, potentially allowing Paraburkholderia dioscoreae Msb3 to thrive in different ecological niches. This trait may facilitate the bacterium's ability to respond to environmental stresses or to utilize varied substrates, which is often observed in members of the Burkholderia genus. The genetic information for Paraburkholderia dioscoreae Msb3 is cataloged under several accession numbers: LR699553.1, LR699554.1, LR699555.1, LR699556.1, and LR699557.1. These accessions reflect its genomic data, supporting further research into its properties and applications. In terms of ecological insight, the motility conferred by flagella may enhance the bacterium's ability to colonize specific environments, interact with plant root systems, or engage in biogeochemical cycles. Such characteristics could be integral to its role in soil ecosystems or its interactions with host organisms, suggesting potential applications in agriculture or bioremediation efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusParaburkholderia
SpeciesParaburkholderia dioscoreae
StrainMsb3

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraburkholderia dioscoreae Msb3, Complete Genome

Gene Summary

Adenine Count

834166 bp

Thymine Count

836680 bp

Guanine Count

1404984 bp

Cytosine Count

1404167 bp

Genome Length

4479997 bp

Protein-coding Genes

4317 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
prephenate dehydratase / arogenate dehydratasePDMSB3_4292Q01269Positive4375955 - 437674929120.8
putative acyl-coa synthetase yngiPDMSB3_4293Q0P4F7Negative4377630 - 437936063734.9
f1 sector of membrane-bound atp synthase, epsilon subunitPDMSB3_4294Q13SQ3Negative4379592 - 438001715020.9
membrane-bound atp synthase, f1 sector, beta-subunitPDMSB3_4295Q13SQ2Negative4380176 - 438157050446.9
f1 sector of membrane-bound atp synthase, gamma subunitPDMSB3_4296Q13SQ1Negative4381671 - 438255532338.2
membrane-bound atp synthase, f1 sector, alpha-subunitPDMSB3_4297Q13SQ0Negative4382744 - 438428555925.2
atp synthase subunit deltaPDMSB3_4298Q13SP9Negative4384344 - 438488319167.3
f0 sector of membrane-bound atp synthase, subunit bPDMSB3_4299B2T7K4Negative4384886 - 438535617036.5
atp synthase subunit cPDMSB3_4300B1Y3T2Negative4385495 - 43857649063.7
f0 sector of membrane-bound atp synthase, subunit aPDMSB3_4301A6T476Negative4385848 - 438667230162.5

Displaying genes 4341 – 4350 of 8285 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.