Paraburkholderia dioscoreae Msb3

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Paraburkholderia

Description

Paraburkholderia dioscoreae Msb3 is a rod-shaped bacterium characterized by the presence of flagella, which suggests motility. This species is notable for having five replicons, indicating a complex genome organization that may contribute to its adaptability in various environments. The presence of multiple replicons can provide advantages in terms of genetic diversity and regulation, potentially allowing Paraburkholderia dioscoreae Msb3 to thrive in different ecological niches. This trait may facilitate the bacterium's ability to respond to environmental stresses or to utilize varied substrates, which is often observed in members of the Burkholderia genus. The genetic information for Paraburkholderia dioscoreae Msb3 is cataloged under several accession numbers: LR699553.1, LR699554.1, LR699555.1, LR699556.1, and LR699557.1. These accessions reflect its genomic data, supporting further research into its properties and applications. In terms of ecological insight, the motility conferred by flagella may enhance the bacterium's ability to colonize specific environments, interact with plant root systems, or engage in biogeochemical cycles. Such characteristics could be integral to its role in soil ecosystems or its interactions with host organisms, suggesting potential applications in agriculture or bioremediation efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusParaburkholderia
SpeciesParaburkholderia dioscoreae
StrainMsb3

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraburkholderia dioscoreae Msb3, Complete Genome

Gene Summary

Adenine Count

834166 bp

Thymine Count

836680 bp

Guanine Count

1404984 bp

Cytosine Count

1404167 bp

Genome Length

4479997 bp

Protein-coding Genes

4317 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative glutamine amidotransferasePDMSB3_3334Q9CE00Negative3424432 - 342593453326.2
kef-type k+ transport system, predicted nad-binding componentPDMSB3_3335P39830Negative3426110 - 342786762676.1
conserved protein of unknown functionPDMSB3_3336Not AvailablePositive3428100 - 342878624580.3
putative tartrate transporterPDMSB3_3337Q44470Positive3428794 - 343014348041.5
transcriptional regulatorPDMSB3_3338P54988Positive3430353 - 343103325696.2
amidase, asp-trnaasn/glu-trnagln amidotransferase a subunitPDMSB3_3339Q38M35Positive3431126 - 343250547646.3
disulfide bond formation protein bPDMSB3_3340Q13V94Positive3432608 - 343311718636.4
xanthine dehydrogenase, small subunitPDMSB3_3341Q12553Positive3433432 - 343506358661.8
xanthine dehydrogenase, molybdopterin binding subunitPDMSB3_3342Q9MYW6Positive3435063 - 343746885896.8
xanthine dehydrogenase accessory protein xdhcPDMSB3_3343Q46808Positive3437565 - 343858436090.3

Displaying genes 3371 – 3380 of 8285 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.