Humibacter ginsenosidimutans WJ7-1

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Humibacter

Description

Humibacter ginsenosidimutans WJ7-1 is characterized by having a single replicon, which is a notable feature that contributes to its genomic stability and replication efficiency. Its genomic information is accessible through the accession number CP042305.1, providing researchers with the necessary data for further analysis and study. As a member of the genus Humibacter, this bacterium is likely to play a role in the degradation of organic matter in its environment, contributing to nutrient cycling. The specific ecological role of Humibacter ginsenosidimutans WJ7-1, however, remains to be fully elucidated. Understanding its metabolic pathways and interactions with other microorganisms could offer insights into its potential applications in bioremediation or agriculture. The presence of a single replicon suggests a streamlined genomic architecture, which may enhance its adaptability to environmental changes. This adaptability is crucial for organisms involved in the decomposition of organic materials, as they often encounter fluctuating conditions. Overall, Humibacter ginsenosidimutans WJ7-1 exemplifies the complexity and significance of soil microbiota in ecological processes, particularly in the context of organic matter transformation and nutrient availability.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusHumibacter
SpeciesHumibacter ginsenosidimutans
StrainWJ7-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Humibacter ginsenosidimutans WJ7-1, Complete Genome

Gene Summary

Adenine Count

661040 bp

Thymine Count

666763 bp

Guanine Count

1430641 bp

Cytosine Count

1425194 bp

Genome Length

4183638 bp

Protein-coding Genes

3723 genes

Non-Coding Genes

102 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thiolase family proteinFPZ11_17840I6XHJ3Positive3903235 - 390443441611.3
3-hydroxyacyl-coa dehydrogenaseFPZ11_17845P9WGQ6Positive3904464 - 390524926961.8
marr family transcriptional regulatorFPZ11_17850O34777Negative3905257 - 390573616934.2
mbl fold metallo-hydrolaseFPZ11_17855Q1M813Negative3905741 - 390660731586.9
helix-turn-helix domain-containing proteinFPZ11_17860Q3J4E6Negative3906706 - 390815752933.7
phosphoenolpyruvate carboxykinase (gtp)FPZ11_17865Q6AGS4Positive3908336 - 391030071882.7
peptide chain release factor n(5)-glutamine methyltransferaseFPZ11_17870Q9ZNB0Negative3910471 - 391114523949.0
peptide chain release factor n(5)-glutamine methyltransferaseFPZ11_17875Q9ZNB0Negative3911599 - 391288544151.9
atp-binding cassette domain-containing proteinFPZ11_17880Q13ZJ1Positive3912989 - 391391533828.9
abc transporter permeaseFPZ11_17885P06755Positive3913912 - 391473929644.1

Displaying genes 3571 – 3580 of 3825 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.