Humibacter ginsenosidimutans WJ7-1

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Humibacter

Description

Humibacter ginsenosidimutans WJ7-1 is characterized by having a single replicon, which is a notable feature that contributes to its genomic stability and replication efficiency. Its genomic information is accessible through the accession number CP042305.1, providing researchers with the necessary data for further analysis and study. As a member of the genus Humibacter, this bacterium is likely to play a role in the degradation of organic matter in its environment, contributing to nutrient cycling. The specific ecological role of Humibacter ginsenosidimutans WJ7-1, however, remains to be fully elucidated. Understanding its metabolic pathways and interactions with other microorganisms could offer insights into its potential applications in bioremediation or agriculture. The presence of a single replicon suggests a streamlined genomic architecture, which may enhance its adaptability to environmental changes. This adaptability is crucial for organisms involved in the decomposition of organic materials, as they often encounter fluctuating conditions. Overall, Humibacter ginsenosidimutans WJ7-1 exemplifies the complexity and significance of soil microbiota in ecological processes, particularly in the context of organic matter transformation and nutrient availability.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusHumibacter
SpeciesHumibacter ginsenosidimutans
StrainWJ7-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Humibacter ginsenosidimutans WJ7-1, Complete Genome

Gene Summary

Adenine Count

661040 bp

Thymine Count

666763 bp

Guanine Count

1430641 bp

Cytosine Count

1425194 bp

Genome Length

4183638 bp

Protein-coding Genes

3723 genes

Non-Coding Genes

102 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter atp-binding proteinFPZ11_17190Q39GT7Positive3738344 - 373938136171.0
abc transporter permeaseFPZ11_17195O07017Positive3739397 - 374019428406.6
sensor histidine kinaseFPZ11_17200O34757Positive3740199 - 374153646870.8
response regulator transcription factorFPZ11_17205O34723Positive3741533 - 374214721639.2
ppox class f420-dependent oxidoreductaseFPZ11_17210O06553Negative3742190 - 374258214579.2
nad-dependent epimerase/dehydratase family proteinFPZ11_17215Q2MFU6Negative3742647 - 374361834789.2
sigma-70 family rna polymerase sigma factorFPZ11_17220L0TCG5Negative3743854 - 374478033936.8
nad(p)-dependent oxidoreductaseFPZ11_17225Q8PDW5Positive3744846 - 374578132090.3
pspc domain-containing proteinFPZ11_17230Not AvailablePositive3745941 - 37461417340.42
Trna-serNot AvailableNot AvailablePositive3746248 - 3746335Not Available

Displaying genes 3441 – 3450 of 3825 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.