Humibacter ginsenosidimutans WJ7-1

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Humibacter

Description

Humibacter ginsenosidimutans WJ7-1 is characterized by having a single replicon, which is a notable feature that contributes to its genomic stability and replication efficiency. Its genomic information is accessible through the accession number CP042305.1, providing researchers with the necessary data for further analysis and study. As a member of the genus Humibacter, this bacterium is likely to play a role in the degradation of organic matter in its environment, contributing to nutrient cycling. The specific ecological role of Humibacter ginsenosidimutans WJ7-1, however, remains to be fully elucidated. Understanding its metabolic pathways and interactions with other microorganisms could offer insights into its potential applications in bioremediation or agriculture. The presence of a single replicon suggests a streamlined genomic architecture, which may enhance its adaptability to environmental changes. This adaptability is crucial for organisms involved in the decomposition of organic materials, as they often encounter fluctuating conditions. Overall, Humibacter ginsenosidimutans WJ7-1 exemplifies the complexity and significance of soil microbiota in ecological processes, particularly in the context of organic matter transformation and nutrient availability.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusHumibacter
SpeciesHumibacter ginsenosidimutans
StrainWJ7-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Humibacter ginsenosidimutans WJ7-1, Complete Genome

Gene Summary

Adenine Count

661040 bp

Thymine Count

666763 bp

Guanine Count

1430641 bp

Cytosine Count

1425194 bp

Genome Length

4183638 bp

Protein-coding Genes

3723 genes

Non-Coding Genes

102 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sugar abc transporter substrate-binding proteinFPZ11_16990Q578M8Positive3685807 - 368709045536.8
sugar abc transporter permeaseFPZ11_16995O32155Positive3687209 - 368815334972.3
carbohydrate abc transporter permeaseFPZ11_17000O31520Positive3688153 - 368906433836.9
duf624 domain-containing proteinFPZ11_17005Not AvailablePositive3689061 - 368977425035.4
tetr/acrr family transcriptional regulatorFPZ11_17010O07001Negative3689821 - 369043821860.4
nad-dependent epimerase/dehydratase family proteinFPZ11_17015B6SZW0Positive3690471 - 369134631316.3
thua domain-containing proteinFPZ11_17020Not AvailableNegative3691460 - 369222727310.7
mfs transporterFPZ11_17025B1JFW5Positive3692435 - 369372446816.6
excinuclease abc subunit uvraFPZ11_17030Q56242Positive3694006 - 369639984395.1
gfo/idh/moca family oxidoreductaseFPZ11_17035Q8GAK6Positive3696740 - 369792443882.6

Displaying genes 3401 – 3410 of 3825 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.