Humibacter ginsenosidimutans WJ7-1

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Humibacter

Description

Humibacter ginsenosidimutans WJ7-1 is characterized by having a single replicon, which is a notable feature that contributes to its genomic stability and replication efficiency. Its genomic information is accessible through the accession number CP042305.1, providing researchers with the necessary data for further analysis and study. As a member of the genus Humibacter, this bacterium is likely to play a role in the degradation of organic matter in its environment, contributing to nutrient cycling. The specific ecological role of Humibacter ginsenosidimutans WJ7-1, however, remains to be fully elucidated. Understanding its metabolic pathways and interactions with other microorganisms could offer insights into its potential applications in bioremediation or agriculture. The presence of a single replicon suggests a streamlined genomic architecture, which may enhance its adaptability to environmental changes. This adaptability is crucial for organisms involved in the decomposition of organic materials, as they often encounter fluctuating conditions. Overall, Humibacter ginsenosidimutans WJ7-1 exemplifies the complexity and significance of soil microbiota in ecological processes, particularly in the context of organic matter transformation and nutrient availability.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusHumibacter
SpeciesHumibacter ginsenosidimutans
StrainWJ7-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Humibacter ginsenosidimutans WJ7-1, Complete Genome

Gene Summary

Adenine Count

661040 bp

Thymine Count

666763 bp

Guanine Count

1430641 bp

Cytosine Count

1425194 bp

Genome Length

4183638 bp

Protein-coding Genes

3723 genes

Non-Coding Genes

102 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
1,4-dihydroxy-2-naphthoyl-coa synthaseFPZ11_16040P9WNP4Positive3481171 - 348211234162.1
amp-binding proteinFPZ11_16045P9WQ38Positive3482306 - 348335835816.8
1,4-dihydroxy-2-naphthoate polyprenyltransferaseFPZ11_16050P65651Positive3483511 - 348448234230.7
duf4229 domain-containing proteinFPZ11_16055Not AvailableNegative3484602 - 348491611343.9
pldc_n domain-containing proteinFPZ11_16060Not AvailablePositive3485207 - 348556913553.5
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthaseFPZ11_16065Q6AHC2Positive3485562 - 348749066387.4
polyphosphate kinase 2 family proteinFPZ11_16070M9XB82Positive3487565 - 348841331933.9
isochorismate synthaseFPZ11_16075P45744Negative3488539 - 348975643519.7
duf2804 domain-containing proteinFPZ11_16080Not AvailablePositive3489906 - 349095838378.3
class i sam-dependent methyltransferaseFPZ11_16085B0RCZ0Positive3491304 - 349204126093.9

Displaying genes 3211 – 3220 of 3825 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.