Humibacter ginsenosidimutans WJ7-1

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Humibacter

Description

Humibacter ginsenosidimutans WJ7-1 is characterized by having a single replicon, which is a notable feature that contributes to its genomic stability and replication efficiency. Its genomic information is accessible through the accession number CP042305.1, providing researchers with the necessary data for further analysis and study. As a member of the genus Humibacter, this bacterium is likely to play a role in the degradation of organic matter in its environment, contributing to nutrient cycling. The specific ecological role of Humibacter ginsenosidimutans WJ7-1, however, remains to be fully elucidated. Understanding its metabolic pathways and interactions with other microorganisms could offer insights into its potential applications in bioremediation or agriculture. The presence of a single replicon suggests a streamlined genomic architecture, which may enhance its adaptability to environmental changes. This adaptability is crucial for organisms involved in the decomposition of organic materials, as they often encounter fluctuating conditions. Overall, Humibacter ginsenosidimutans WJ7-1 exemplifies the complexity and significance of soil microbiota in ecological processes, particularly in the context of organic matter transformation and nutrient availability.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusHumibacter
SpeciesHumibacter ginsenosidimutans
StrainWJ7-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Humibacter ginsenosidimutans WJ7-1, Complete Genome

Gene Summary

Adenine Count

661040 bp

Thymine Count

666763 bp

Guanine Count

1430641 bp

Cytosine Count

1425194 bp

Genome Length

4183638 bp

Protein-coding Genes

3723 genes

Non-Coding Genes

102 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chbg/hpnk family deacetylaseFPZ11_14990Not AvailablePositive3242033 - 324285429146.0
php domain-containing proteinFPZ11_14995Not AvailablePositive3242873 - 324409643632.4
Trna-argNot AvailableNot AvailablePositive3244301 - 3244376Not Available
tyrosine-type recombinase/integraseFPZ11_15005P22877Positive3244510 - 324570644066.7
duf433 domain-containing proteinFPZ11_15010P9WLC5Positive3245924 - 324677531943.2
hypothetical proteinFPZ11_15015Not AvailablePositive3246796 - 324719715031.4
aaa family atpaseFPZ11_15020Q44363Negative3247792 - 325052198170.5
pyridoxal 5'-phosphate synthase lyase subunit pdxsFPZ11_15025Q6AFB9Positive3250886 - 325178831493.9
pyridoxal 5'-phosphate synthase glutaminase subunit pdxtFPZ11_15030Q6AFB8Positive3251785 - 325247424486.5
m23 family metallopeptidaseFPZ11_15035P44693Positive3253175 - 325405330463.2

Displaying genes 3001 – 3010 of 3825 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.