Humibacter ginsenosidimutans WJ7-1

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Humibacter

Description

Humibacter ginsenosidimutans WJ7-1 is characterized by having a single replicon, which is a notable feature that contributes to its genomic stability and replication efficiency. Its genomic information is accessible through the accession number CP042305.1, providing researchers with the necessary data for further analysis and study. As a member of the genus Humibacter, this bacterium is likely to play a role in the degradation of organic matter in its environment, contributing to nutrient cycling. The specific ecological role of Humibacter ginsenosidimutans WJ7-1, however, remains to be fully elucidated. Understanding its metabolic pathways and interactions with other microorganisms could offer insights into its potential applications in bioremediation or agriculture. The presence of a single replicon suggests a streamlined genomic architecture, which may enhance its adaptability to environmental changes. This adaptability is crucial for organisms involved in the decomposition of organic materials, as they often encounter fluctuating conditions. Overall, Humibacter ginsenosidimutans WJ7-1 exemplifies the complexity and significance of soil microbiota in ecological processes, particularly in the context of organic matter transformation and nutrient availability.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusHumibacter
SpeciesHumibacter ginsenosidimutans
StrainWJ7-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Humibacter ginsenosidimutans WJ7-1, Complete Genome

Gene Summary

Adenine Count

661040 bp

Thymine Count

666763 bp

Guanine Count

1430641 bp

Cytosine Count

1425194 bp

Genome Length

4183638 bp

Protein-coding Genes

3723 genes

Non-Coding Genes

102 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
molecular chaperone dnakFPZ11_05365O66611Positive1121221 - 112152910947.8
nad(p)/fad-dependent oxidoreductaseFPZ11_05370P06108Negative1121579 - 112306051980.6
heavy-metal-associated domain-containing proteinFPZ11_05375Q4A0G2Positive1123266 - 11234757086.26
copper-translocating p-type atpaseFPZ11_05380P9WPU0Positive1123546 - 112571174740.6
pyridoxamine 5'-phosphate oxidase family proteinFPZ11_05385P9WL04Positive1125776 - 112618915142.9
Tmrna,resume consensus sequence (at 88): aataagtgccaattccaaNot AvailableNot AvailablePositive1126683 - 1127076Not Available
atp-dependent clp protease adapter clpsFPZ11_05395Q82D28Positive1127180 - 112751212299.7
duf2017 family proteinFPZ11_05400Not AvailablePositive1127509 - 112805720363.7
peptidoglycan-binding proteinFPZ11_05405P49320Negative1128079 - 112857317050.1
ssra-binding protein smpbFPZ11_05410Q6AEL7Negative1128681 - 112915718136.7

Displaying genes 1131 – 1140 of 3825 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.