Echinicola soli LN3S3

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Echinicola

Description

Echinicola soli LN3S3 is characterized as a Gram-negative, rod-shaped bacterium. It possesses a single replicon, which is an important feature for understanding its genetic structure and replication dynamics. The strain is cataloged under the accession number CP041253.1, providing a reference point for researchers interested in its genomic data. The Gram-negative classification indicates that Echinicola soli LN3S3 has a distinct cell wall structure, characterized by a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides. This structural feature often influences the bacterium's interactions with its environment, including its susceptibility to antibiotics and its ability to thrive in various ecological niches. The presence of a single replicon suggests a streamlined genetic organization, which can be advantageous for stability and efficient replication under certain conditions. This trait may also play a role in the bacterium's adaptability to its surroundings, as it can rapidly respond to environmental changes without the complexity of multiple replicons. In summary, Echinicola soli LN3S3 exemplifies important characteristics of Gram-negative bacteria, including its rod shape and single replicon structure. These traits may contribute to the organism's ecological versatility and its potential role in various microbial communities, underscoring the importance of studying such bacteria to understand their ecological and biological significance.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusEchinicola
SpeciesEchinicola soli
StrainLN3S3

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Echinicola soli LN3S3, Complete Genome

Gene Summary

Adenine Count

1550859 bp

Thymine Count

1558905 bp

Guanine Count

1221369 bp

Cytosine Count

1219171 bp

Genome Length

5550304 bp

Protein-coding Genes

4213 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinFKX85_03840Not AvailablePositive923243 - 92420537901.0
fasciclin domain-containing proteinFKX85_03845Q62009Negative924208 - 92555449302.6
gliding motility lipoprotein gldbFKX85_03850Not AvailablePositive925680 - 92667238519.7
glycoside hydrolase family 28 proteinFKX85_03855A7PZL3Positive927456 - 92907860158.9
pectate lyaseFKX85_03860Not AvailablePositive929071 - 93015941034.8
sigma-70 family rna polymerase sigma factorFKX85_03865Q3IYV6Positive930662 - 93123422571.3
duf4974 domain-containing proteinFKX85_03870Not AvailablePositive931383 - 93245940892.6
tonb-dependent receptorFKX85_03875T2KPJ3Positive932572 - 936093130316.0
ragb/susd family nutrient uptake outer membrane proteinFKX85_03880Not AvailablePositive936111 - 93807875452.0
phosphatase pap2 family proteinFKX85_03885Q57819Negative938353 - 93906927311.6

Displaying genes 771 – 780 of 3576 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.