Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola soli |
| Strain | LN3S3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550859 bp
Thymine Count
1558905 bp
Guanine Count
1221369 bp
Cytosine Count
1219171 bp
Genome Length
5550304 bp
Protein-coding Genes
4213 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanine--trna ligase subunit alpha | FKX85_02840 | Q11Q26 | Positive | 664644 - 665672 | 38715.2 |
| peptidylprolyl isomerase | FKX85_02845 | Q88QT4 | Negative | 665743 - 667152 | 53038.7 |
| peptidyl-prolyl cis-trans isomerase | FKX85_02850 | Not Available | Negative | 667145 - 668065 | 35573.4 |
| peptidylprolyl isomerase | FKX85_02855 | Q145L3 | Negative | 668016 - 670031 | 76692.8 |
| atp-binding protein | FKX85_02860 | P17904 | Negative | 670124 - 670552 | 16481.1 |
| stas domain-containing protein | FKX85_02865 | P0A4J9 | Negative | 670542 - 670886 | 12752.2 |
| spoiie family protein phosphatase | FKX85_02870 | P40399 | Negative | 670920 - 672977 | 78853.8 |
| duf4197 domain-containing protein | FKX85_02875 | Not Available | Positive | 673060 - 673776 | 25931.2 |
| rlua family pseudouridine synthase | FKX85_02880 | O50310 | Negative | 675428 - 676501 | 40291.9 |
| 1-aminocyclopropane-1-carboxylate deaminase/d-cysteine desulfhydrase | FKX85_02885 | Q9V2L2 | Positive | 676616 - 677485 | 32067.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
