Echinicola soli LN3S3

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Echinicola

Description

Echinicola soli LN3S3 is characterized as a Gram-negative, rod-shaped bacterium. It possesses a single replicon, which is an important feature for understanding its genetic structure and replication dynamics. The strain is cataloged under the accession number CP041253.1, providing a reference point for researchers interested in its genomic data. The Gram-negative classification indicates that Echinicola soli LN3S3 has a distinct cell wall structure, characterized by a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides. This structural feature often influences the bacterium's interactions with its environment, including its susceptibility to antibiotics and its ability to thrive in various ecological niches. The presence of a single replicon suggests a streamlined genetic organization, which can be advantageous for stability and efficient replication under certain conditions. This trait may also play a role in the bacterium's adaptability to its surroundings, as it can rapidly respond to environmental changes without the complexity of multiple replicons. In summary, Echinicola soli LN3S3 exemplifies important characteristics of Gram-negative bacteria, including its rod shape and single replicon structure. These traits may contribute to the organism's ecological versatility and its potential role in various microbial communities, underscoring the importance of studying such bacteria to understand their ecological and biological significance.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusEchinicola
SpeciesEchinicola soli
StrainLN3S3

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Echinicola soli LN3S3, Complete Genome

Gene Summary

Adenine Count

1550859 bp

Thymine Count

1558905 bp

Guanine Count

1221369 bp

Cytosine Count

1219171 bp

Genome Length

5550304 bp

Protein-coding Genes

4213 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phenylalanine--trna ligase subunit alphaFKX85_02840Q11Q26Positive664644 - 66567238715.2
peptidylprolyl isomeraseFKX85_02845Q88QT4Negative665743 - 66715253038.7
peptidyl-prolyl cis-trans isomeraseFKX85_02850Not AvailableNegative667145 - 66806535573.4
peptidylprolyl isomeraseFKX85_02855Q145L3Negative668016 - 67003176692.8
atp-binding proteinFKX85_02860P17904Negative670124 - 67055216481.1
stas domain-containing proteinFKX85_02865P0A4J9Negative670542 - 67088612752.2
spoiie family protein phosphataseFKX85_02870P40399Negative670920 - 67297778853.8
duf4197 domain-containing proteinFKX85_02875Not AvailablePositive673060 - 67377625931.2
rlua family pseudouridine synthaseFKX85_02880O50310Negative675428 - 67650140291.9
1-aminocyclopropane-1-carboxylate deaminase/d-cysteine desulfhydraseFKX85_02885Q9V2L2Positive676616 - 67748532067.6

Displaying genes 571 – 580 of 3576 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.