Shewanella polaris SM1901

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella polaris SM1901 is a notable bacterium characterized by its presence of flagella, which suggests it possesses motility. This feature is essential for various ecological interactions, including nutrient acquisition and colonization of environments. The organism has a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation. The genomic data for Shewanella polaris SM1901 can be accessed under the accession number CP041036.1. This genomic information is crucial for understanding the metabolic pathways and potential ecological roles of the bacterium. Ecologically, Shewanella species are typically known for their versatility in diverse environments, including marine and sedimentary ecosystems. The presence of flagella in S. polaris SM1901 may enhance its ability to navigate through these environments, allowing it to exploit various electron acceptors and contribute to biogeochemical cycling. Understanding the traits of S. polaris SM1901 not only sheds light on its specific biological functions but also illustrates its potential role in the broader ecosystem, particularly in nutrient cycling and the degradation of organic matter in polar regions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella polaris
StrainSM1901

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella polaris SM1901, Complete Genome

Gene Summary

Adenine Count

1383036 bp

Thymine Count

1381481 bp

Guanine Count

936245 bp

Cytosine Count

947775 bp

Genome Length

4648537 bp

Protein-coding Genes

3914 genes

Non-Coding Genes

158 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2956 family proteinFH971_01395Not AvailableNegative320488 - 32082612798.2
trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trmlFH971_01400B8CHC9Negative320826 - 32129017211.8
mechanosensitive ion channelFH971_01405O28726Negative321541 - 32292050960.4
yqae/pmp3 family membrane proteinFH971_01410Q9I5W9Positive323236 - 3233945716.62
hamp domain-containing proteinFH971_01415P0AE84Negative323670 - 32507352404.3
response regulatorFH971_01420P0AE89Negative325073 - 32575926129.9
cytochrome c biosynthesis proteinFH971_01425Not AvailableNegative325876 - 32730351879.9
periplasmic heavy metal sensorFH971_01430C6ECL5Positive327580 - 32808018787.5
cation diffusion facilitator family transporterFH971_01435A8AL14Positive328280 - 32914931481.3
nitrogen regulation protein nr(i)FH971_01440P0AFB9Negative329405 - 33081752071.3

Displaying genes 331 – 340 of 2606 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.