Shewanella polaris SM1901

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella polaris SM1901 is a notable bacterium characterized by its presence of flagella, which suggests it possesses motility. This feature is essential for various ecological interactions, including nutrient acquisition and colonization of environments. The organism has a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation. The genomic data for Shewanella polaris SM1901 can be accessed under the accession number CP041036.1. This genomic information is crucial for understanding the metabolic pathways and potential ecological roles of the bacterium. Ecologically, Shewanella species are typically known for their versatility in diverse environments, including marine and sedimentary ecosystems. The presence of flagella in S. polaris SM1901 may enhance its ability to navigate through these environments, allowing it to exploit various electron acceptors and contribute to biogeochemical cycling. Understanding the traits of S. polaris SM1901 not only sheds light on its specific biological functions but also illustrates its potential role in the broader ecosystem, particularly in nutrient cycling and the degradation of organic matter in polar regions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella polaris
StrainSM1901

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella polaris SM1901, Complete Genome

Gene Summary

Adenine Count

1383036 bp

Thymine Count

1381481 bp

Guanine Count

936245 bp

Cytosine Count

947775 bp

Genome Length

4648537 bp

Protein-coding Genes

3914 genes

Non-Coding Genes

158 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
efflux rnd transporter permease subunitFH971_10645Q57124Negative2441694 - 2444789113169.0
efflux rnd transporter periplasmic adaptor subunitFH971_10650Q8FWV8Negative2444786 - 244586839924.1
outer membrane protein assembly factor bamcFH971_10655A8FW15Negative2446380 - 244747741844.4
4-hydroxy-tetrahydrodipicolinate synthaseFH971_10660Q082V3Negative2447482 - 244836631229.7
glycine cleavage system transcriptional repressorFH971_10665P0A9I3Positive2448649 - 244918519785.1
thioredoxin-dependent thiol peroxidaseFH971_10670P0AE54Positive2449272 - 244973917041.4
hypothetical proteinFH971_10675Q87KV8Negative2450039 - 245201871360.1
2-methylaconitate cis-trans isomerase prpfFH971_10680Q8EJW4Negative2452491 - 245366040804.8
fe/s-dependent 2-methylisocitrate dehydratase acndFH971_10685Q8EJW3Negative2453750 - 245635395341.7
2-methylcitrate synthaseFH971_10690Q8EJW2Negative2456429 - 245755341496.6

Displaying genes 2181 – 2190 of 2606 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.