Shewanella polaris SM1901

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella polaris SM1901 is a notable bacterium characterized by its presence of flagella, which suggests it possesses motility. This feature is essential for various ecological interactions, including nutrient acquisition and colonization of environments. The organism has a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation. The genomic data for Shewanella polaris SM1901 can be accessed under the accession number CP041036.1. This genomic information is crucial for understanding the metabolic pathways and potential ecological roles of the bacterium. Ecologically, Shewanella species are typically known for their versatility in diverse environments, including marine and sedimentary ecosystems. The presence of flagella in S. polaris SM1901 may enhance its ability to navigate through these environments, allowing it to exploit various electron acceptors and contribute to biogeochemical cycling. Understanding the traits of S. polaris SM1901 not only sheds light on its specific biological functions but also illustrates its potential role in the broader ecosystem, particularly in nutrient cycling and the degradation of organic matter in polar regions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella polaris
StrainSM1901

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella polaris SM1901, Complete Genome

Gene Summary

Adenine Count

1383036 bp

Thymine Count

1381481 bp

Guanine Count

936245 bp

Cytosine Count

947775 bp

Genome Length

4648537 bp

Protein-coding Genes

3914 genes

Non-Coding Genes

158 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l20FH971_09795Q082E4Positive2246632 - 224699113698.9
aspartate/tyrosine/aromatic aminotransferaseFH971_09800P00509Positive2247212 - 224840543217.6
uridine diphosphate-n-acetylglucosamine-binding protein yvckFH971_09805Q9CN20Negative2248640 - 224958133779.9
glucosaminidaseFH971_09810P27297Positive2249850 - 225066830995.1
duf2987 domain-containing proteinFH971_09815Not AvailablePositive2250661 - 225131424891.3
trna 2-thiocytidine(32) synthetase ttcaFH971_09820Q082E9Negative2251398 - 225234235447.5
universal stress protein uspeFH971_09825P0AAC2Negative2252432 - 225335834410.1
fumarate/nitrate reduction transcriptional regulator fnrFH971_09830P46148Negative2253459 - 225421127738.4
sulfite exporter taue/safe family proteinFH971_09835Not AvailableNegative2254536 - 225522524735.0
cbb3-type cytochrome oxidase assembly protein ccosFH971_09840Not AvailableNegative2255231 - 225558112576.4

Displaying genes 2011 – 2020 of 2606 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.