Shewanella polaris SM1901

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella polaris SM1901 is a notable bacterium characterized by its presence of flagella, which suggests it possesses motility. This feature is essential for various ecological interactions, including nutrient acquisition and colonization of environments. The organism has a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation. The genomic data for Shewanella polaris SM1901 can be accessed under the accession number CP041036.1. This genomic information is crucial for understanding the metabolic pathways and potential ecological roles of the bacterium. Ecologically, Shewanella species are typically known for their versatility in diverse environments, including marine and sedimentary ecosystems. The presence of flagella in S. polaris SM1901 may enhance its ability to navigate through these environments, allowing it to exploit various electron acceptors and contribute to biogeochemical cycling. Understanding the traits of S. polaris SM1901 not only sheds light on its specific biological functions but also illustrates its potential role in the broader ecosystem, particularly in nutrient cycling and the degradation of organic matter in polar regions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella polaris
StrainSM1901

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella polaris SM1901, Complete Genome

Gene Summary

Adenine Count

1383036 bp

Thymine Count

1381481 bp

Guanine Count

936245 bp

Cytosine Count

947775 bp

Genome Length

4648537 bp

Protein-coding Genes

3914 genes

Non-Coding Genes

158 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
yhgn family naat transporterFH971_00245P67144Positive59291 - 5989021602.8
hypothetical proteinFH971_00250Not AvailablePositive60136 - 6045011459.0
m6 family metalloprotease domain-containing proteinFH971_00255Q9KMU6Positive60453 - 6305993346.0
chorismate lyaseFH971_00260Q08A04Negative63160 - 6373521480.8
flagellar basal body-associated protein flilFH971_00265O67712Positive63863 - 6430917076.7
23s rrna (adenine(1618)-n(6))-methyltransferase rlmfFH971_00270Q08A02Positive64309 - 6536439110.3
formate dehydrogenase accessory sulfurtransferase fdhdFH971_00275Q71WJ5Negative65361 - 6621530988.3
duf3305 domain-containing proteinFH971_00280Not AvailablePositive66547 - 6701417673.1
duf3306 domain-containing proteinFH971_00285Not AvailablePositive67011 - 6767024164.7
4fe-4s dicluster domain-containing proteinFH971_00290Not AvailablePositive67822 - 6950161153.7

Displaying genes 101 – 110 of 2606 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.