Vibrio aquimaris THAF100

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio aquimaris THAF100 is a marine bacterium characterized by its possession of four replicons. This multi-replicon structure is indicative of the organism's genetic complexity, which may contribute to its adaptability in various aquatic environments. The strain is cataloged under several accession numbers: CP045350.1, CP045351.1, CP045352.1, and CP045353.1, facilitating access to its genomic data for further research. The presence of multiple replicons in Vibrio aquimaris THAF100 suggests a potential for diverse genetic regulation and metabolic capabilities. This feature may enhance the bacterium's ability to thrive in fluctuating marine ecosystems, where it can encounter varying nutrient availability and environmental conditions. Understanding the genomic structure of Vibrio aquimaris THAF100 can provide insights into its ecological role in marine environments, including its interactions with other microorganisms and its contribution to nutrient cycling. The strain's adaptability and genetic diversity may allow it to play a significant role in the microbiome of marine habitats, influencing both microbial dynamics and ecosystem health. Further investigation into the specific functions and interactions of this bacterium could elucidate its ecological importance and potential applications in biotechnology or marine science.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio aquimaris
StrainTHAF100

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio aquimaris THAF100
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio aquimaris THAF100, Complete Genome

Gene Summary

Adenine Count

896773 bp

Thymine Count

896554 bp

Guanine Count

669766 bp

Cytosine Count

675578 bp

Genome Length

3138671 bp

Protein-coding Genes

2796 genes

Non-Coding Genes

139 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipopolysaccharide core heptosyltransferase rfaqFIV01_00765Q57336Negative160784 - 16186640400.8
3-deoxy-d-manno-octulosonic acid kinaseFIV01_00770Q9KVB9Positive161961 - 16266827464.6
hypothetical proteinFIV01_00775Not AvailablePositive162759 - 16363433419.1
3-deoxy-d-manno-octulosonic acid transferaseFIV01_00780P0AC77Negative163648 - 16490746102.1
glycosyltransferase sugar-binding region containing dxd motif proteinFIV01_00785P46393Negative164904 - 16569230521.7
glycosyltransferase family 9 (heptosyltransferase)FIV01_00790Q57336Negative165731 - 16674738738.8
adp-heptose--lps heptosyltransferase 2FIV01_00795P37692Negative166744 - 16773636972.8
glycosyltransferase family 25 (lps biosynthesis protein)FIV01_00800Q17FB8Positive167964 - 16868928385.2
o-antigen ligaseFIV01_00805P27243Positive168686 - 16983743948.6
d-inositol 3-phosphate glycosyltransferaseFIV01_00810A4QB40Negative169850 - 17153862914.3

Displaying genes 151 – 160 of 4159 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.