Vibrio aquimaris THAF100

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio aquimaris THAF100 is a marine bacterium characterized by its possession of four replicons. This multi-replicon structure is indicative of the organism's genetic complexity, which may contribute to its adaptability in various aquatic environments. The strain is cataloged under several accession numbers: CP045350.1, CP045351.1, CP045352.1, and CP045353.1, facilitating access to its genomic data for further research. The presence of multiple replicons in Vibrio aquimaris THAF100 suggests a potential for diverse genetic regulation and metabolic capabilities. This feature may enhance the bacterium's ability to thrive in fluctuating marine ecosystems, where it can encounter varying nutrient availability and environmental conditions. Understanding the genomic structure of Vibrio aquimaris THAF100 can provide insights into its ecological role in marine environments, including its interactions with other microorganisms and its contribution to nutrient cycling. The strain's adaptability and genetic diversity may allow it to play a significant role in the microbiome of marine habitats, influencing both microbial dynamics and ecosystem health. Further investigation into the specific functions and interactions of this bacterium could elucidate its ecological importance and potential applications in biotechnology or marine science.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio aquimaris
StrainTHAF100

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio aquimaris THAF100
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio aquimaris THAF100, Complete Genome

Gene Summary

Adenine Count

896773 bp

Thymine Count

896554 bp

Guanine Count

669766 bp

Cytosine Count

675578 bp

Genome Length

3138671 bp

Protein-coding Genes

2796 genes

Non-Coding Genes

139 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipopolysaccharide export system atp-binding protein lptbFIV01_12975P0A9V3Positive2787577 - 278830226834.4
rna polymerase sigma-54 factorFIV01_12980O08429Positive2788354 - 278981454834.6
ribosome hibernation promoting factorFIV01_12985P17161Positive2789840 - 279012711110.2
nitrogen regulatory proteinFIV01_12990P17162Positive2790211 - 279057913675.6
glmz(srna)-inactivating ntpaseFIV01_12995C3LRJ5Positive2790579 - 279144232788.6
phosphocarrier protein nprFIV01_13000Q9KP46Positive2791446 - 279172410115.1
magnesium transporter mgteFIV01_13005O34442Positive2791839 - 279319448917.0
methionine synthaseFIV01_13010Q87L95Negative2793252 - 2796929136584.0
na(+)/h(+) antiporter nhapFIV01_13015G3XD29Positive2797098 - 279838747164.6
hypothetical proteinFIV01_13020Not AvailableNegative2798503 - 279953437574.9

Displaying genes 2581 – 2590 of 4159 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.