Vibrio aquimaris THAF100

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio aquimaris THAF100 is a marine bacterium characterized by its possession of four replicons. This multi-replicon structure is indicative of the organism's genetic complexity, which may contribute to its adaptability in various aquatic environments. The strain is cataloged under several accession numbers: CP045350.1, CP045351.1, CP045352.1, and CP045353.1, facilitating access to its genomic data for further research. The presence of multiple replicons in Vibrio aquimaris THAF100 suggests a potential for diverse genetic regulation and metabolic capabilities. This feature may enhance the bacterium's ability to thrive in fluctuating marine ecosystems, where it can encounter varying nutrient availability and environmental conditions. Understanding the genomic structure of Vibrio aquimaris THAF100 can provide insights into its ecological role in marine environments, including its interactions with other microorganisms and its contribution to nutrient cycling. The strain's adaptability and genetic diversity may allow it to play a significant role in the microbiome of marine habitats, influencing both microbial dynamics and ecosystem health. Further investigation into the specific functions and interactions of this bacterium could elucidate its ecological importance and potential applications in biotechnology or marine science.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio aquimaris
StrainTHAF100

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio aquimaris THAF100
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio aquimaris THAF100, Complete Genome

Gene Summary

Adenine Count

896773 bp

Thymine Count

896554 bp

Guanine Count

669766 bp

Cytosine Count

675578 bp

Genome Length

3138671 bp

Protein-coding Genes

2796 genes

Non-Coding Genes

139 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
inner membrane protein ypjdFIV01_12425P64434Positive2672330 - 267312429063.6
magnesium and cobalt efflux protein corcFIV01_12430P37908Positive2673247 - 267452147202.0
rna polymerase sigma factor rposFIV01_12435O51804Negative2674577 - 267556037275.3
murein hydrolase activator nlpd precursorFIV01_12440Q56131Negative2675624 - 267654133035.4
protein-l-isoaspartate o-methyltransferaseFIV01_12445B7VK62Negative2676544 - 267717023047.7
5'-nucleotidase sureFIV01_12450A7MTT7Negative2677167 - 267793127542.9
trna pseudouridine synthase dFIV01_12455A7MTT9Negative2677928 - 267899239794.1
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseFIV01_12460A7MTS5Negative2679026 - 267950216808.3
2-c-methyl-d-erythritol 4-phosphate cytidylyltransferaseFIV01_12465Q87LQ2Negative2679506 - 268020725294.2
cell division protein ftsbFIV01_12470A7MTT1Negative2680210 - 268048810706.8

Displaying genes 2471 – 2480 of 4159 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.