Vibrio aquimaris THAF100

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio aquimaris THAF100 is a marine bacterium characterized by its possession of four replicons. This multi-replicon structure is indicative of the organism's genetic complexity, which may contribute to its adaptability in various aquatic environments. The strain is cataloged under several accession numbers: CP045350.1, CP045351.1, CP045352.1, and CP045353.1, facilitating access to its genomic data for further research. The presence of multiple replicons in Vibrio aquimaris THAF100 suggests a potential for diverse genetic regulation and metabolic capabilities. This feature may enhance the bacterium's ability to thrive in fluctuating marine ecosystems, where it can encounter varying nutrient availability and environmental conditions. Understanding the genomic structure of Vibrio aquimaris THAF100 can provide insights into its ecological role in marine environments, including its interactions with other microorganisms and its contribution to nutrient cycling. The strain's adaptability and genetic diversity may allow it to play a significant role in the microbiome of marine habitats, influencing both microbial dynamics and ecosystem health. Further investigation into the specific functions and interactions of this bacterium could elucidate its ecological importance and potential applications in biotechnology or marine science.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio aquimaris
StrainTHAF100

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio aquimaris THAF100
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio aquimaris THAF100, Complete Genome

Gene Summary

Adenine Count

896773 bp

Thymine Count

896554 bp

Guanine Count

669766 bp

Cytosine Count

675578 bp

Genome Length

3138671 bp

Protein-coding Genes

2796 genes

Non-Coding Genes

139 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna polymerase iii subunit alphaFIV01_11165P52022Negative2394089 - 2397568130127.0
ribonuclease hiiFIV01_11170Q87MF1Negative2397669 - 239828622615.4
lipid-a-disaccharide synthaseFIV01_11175Q87MF0Negative2398283 - 239943143132.0
acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferaseFIV01_11180Q87ME9Negative2399517 - 240030528287.8
3-hydroxyacyl-[acyl-carrier-protein] dehydratase fabzFIV01_11185Q8DBF0Negative2400307 - 240075916844.3
udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferaseFIV01_11190Q87ME7Negative2400918 - 240194936259.4
chaperone protein skp precursorFIV01_11195Q9KPW1Negative2401956 - 240246519154.4
outer membrane protein assembly factor bama precursorFIV01_11200A8GID8Negative2402483 - 240488588654.8
regulator of sigma-e protease rsepFIV01_11205Q9KPV9Negative2404924 - 240628249001.2
1-deoxy-d-xylulose 5-phosphate reductoisomeraseFIV01_11210Q87ME3Negative2406279 - 240750844645.8

Displaying genes 2221 – 2230 of 4159 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.