Vibrio aquimaris THAF100

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio aquimaris THAF100 is a marine bacterium characterized by its possession of four replicons. This multi-replicon structure is indicative of the organism's genetic complexity, which may contribute to its adaptability in various aquatic environments. The strain is cataloged under several accession numbers: CP045350.1, CP045351.1, CP045352.1, and CP045353.1, facilitating access to its genomic data for further research. The presence of multiple replicons in Vibrio aquimaris THAF100 suggests a potential for diverse genetic regulation and metabolic capabilities. This feature may enhance the bacterium's ability to thrive in fluctuating marine ecosystems, where it can encounter varying nutrient availability and environmental conditions. Understanding the genomic structure of Vibrio aquimaris THAF100 can provide insights into its ecological role in marine environments, including its interactions with other microorganisms and its contribution to nutrient cycling. The strain's adaptability and genetic diversity may allow it to play a significant role in the microbiome of marine habitats, influencing both microbial dynamics and ecosystem health. Further investigation into the specific functions and interactions of this bacterium could elucidate its ecological importance and potential applications in biotechnology or marine science.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio aquimaris
StrainTHAF100

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio aquimaris THAF100
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio aquimaris THAF100, Complete Genome

Gene Summary

Adenine Count

896773 bp

Thymine Count

896554 bp

Guanine Count

669766 bp

Cytosine Count

675578 bp

Genome Length

3138671 bp

Protein-coding Genes

2796 genes

Non-Coding Genes

139 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sensor protein qsecFIV01_05885Q8X524Negative1259467 - 126072647340.6
transcriptional activator protein coprFIV01_05890Q47456Negative1260728 - 126140225904.4
hypothetical proteinFIV01_05895Q55487Positive1261602 - 126260937449.6
undecaprenyl phosphate-alpha-4-amino-4-deoxy-l-arabinose arabinosyl transferaseFIV01_05900A0KGY4Positive1262599 - 126400252084.7
gtra-like proteinFIV01_05905Not AvailablePositive1263999 - 126440614854.3
putative hth-type transcriptional regulator yttpFIV01_05910O34970Positive1264744 - 126536423285.9
acyl-coenzyme a dehydrogenaseFIV01_05915Q47146Positive1265422 - 126771384137.6
putative reductaseFIV01_05920Q87QB9Positive1267891 - 126909343736.0
exodeoxyribonuclease iiiFIV01_05925P09030Negative1269187 - 126999331356.3
50s ribosomal protein l16 arginine hydroxylaseFIV01_05930P27431Negative1270086 - 127122242509.2

Displaying genes 1171 – 1180 of 4159 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.