Sphingobacterium spiritivorum E7288, 29-83

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Sphingobacterium

Description

Sphingobacterium spiritivorum E7288, 29-83 is characterized as a rod-shaped bacterium. This species is notable for possessing two replicons, which may contribute to its genetic diversity and adaptability. Its genomic information is cataloged under the accessions CP068084.1 and CP068085.1, providing a basis for further study and characterization of its genetic makeup. As a member of the Sphingobacterium genus, Sphingobacterium spiritivorum is likely to be involved in the degradation of complex organic materials, which can have implications for bioremediation and nutrient cycling in various environments. The rod shape of this bacterium may also influence its motility and ecological interactions, potentially allowing it to colonize diverse habitats. In summary, the structural and genetic traits of Sphingobacterium spiritivorum E7288, 29-83, such as its rod shape and possession of two replicons, highlight its potential roles in ecological processes. Further investigation of its metabolic capabilities could provide insights into its function in ecosystems, particularly in the breakdown of organic matter and its contributions to environmental sustainability.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSphingobacterium
SpeciesSphingobacterium spiritivorum
StrainE7288, 29-83

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Sphingobacterium spiritivorum E7288, 29-83
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobacterium spiritivorum E7288, 29-83, Complete Genome

Gene Summary

Adenine Count

1547802 bp

Thymine Count

1541996 bp

Guanine Count

1028129 bp

Cytosine Count

1018945 bp

Genome Length

5136872 bp

Protein-coding Genes

4278 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase type iiI6J01_01905P39912Positive502794 - 50390040952.3
3-phosphoshikimate 1-carboxyvinyltransferaseI6J01_01910Q5LHG9Positive503900 - 50515046014.2
chorismate synthaseI6J01_01915Q11Y57Positive505226 - 50633239990.3
rok family proteinI6J01_01920P44554Positive506319 - 50717631907.4
transketolaseI6J01_01925P35488Negative507209 - 50962990702.6
dead/deah box helicaseI6J01_01930P25888Positive509825 - 51102145176.8
hypothetical proteinI6J01_01935Not AvailablePositive511108 - 51185427889.0
nudix hydrolaseI6J01_01940B0TX27Positive511879 - 51233117393.6
23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmhI6J01_01945A6LDQ1Negative512799 - 51327218362.3
duf3078 domain-containing proteinI6J01_01950Not AvailablePositive513456 - 51435233812.9

Displaying genes 381 – 390 of 4356 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
BacteremiaCausesPMC3698308

Displaying health effects 1 – 1 of 1 in total