Sphingobacterium spiritivorum D7529, F8081

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Sphingobacterium

Description

Sphingobacterium spiritivorum D7529 and F8081 are characterized as rod-shaped bacteria. They possess a single replicon, indicating that they have a straightforward genomic organization. The strain D7529 has been assigned the accession number CP068083.1, which provides a reference for its genetic information in biological databases. The genus Sphingobacterium is known for its capacity to thrive in various environments, often exhibiting versatility in nutrient utilization. This trait can contribute to their ecological roles, particularly in decomposing organic matter and participating in soil health. The rod shape of these bacteria is typical among many members of the Sphingobacterium genus and may play a role in their motility and colonization of substrates. In summary, Sphingobacterium spiritivorum D7529 and F8081, with their rod morphology and single replicon, exemplify the structural and genetic characteristics of their genus. Their ecological significance is enhanced by their potential contributions to nutrient cycling and soil ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSphingobacterium
SpeciesSphingobacterium spiritivorum
StrainD7529, F8081

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Sphingobacterium spiritivorum D7529, F8081
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobacterium spiritivorum D7529, F8081, Complete Genome

Gene Summary

Adenine Count

1556165 bp

Thymine Count

1549288 bp

Guanine Count

1019612 bp

Cytosine Count

1010237 bp

Genome Length

5135302 bp

Protein-coding Genes

4250 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thiamine phosphate synthaseI6J02_21370Q21VL5Positive5066882 - 506752023316.9
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinaseI6J02_21375P56904Positive5067517 - 506835330142.4
thiaminase iiI6J02_21380P25052Positive5068340 - 506898724882.6
c-type cytochromeI6J02_21385Q50233Negative5069072 - 507021443636.0
tonb-dependent receptorI6J02_21390Not AvailablePositive5070353 - 5073139104412.0
duf4876 domain-containing proteinI6J02_21395Not AvailablePositive5073157 - 507447048293.9
hypothetical proteinI6J02_21400Not AvailablePositive5074523 - 507607960413.4
m1 family metallopeptidaseI6J02_21405Not AvailableNegative5076148 - 507801070968.2
sh3 domain-containing proteinI6J02_21410Not AvailableNegative5078189 - 507860815288.0
bon domain-containing proteinI6J02_21415Not AvailableNegative5078630 - 507911517033.9

Displaying genes 4281 – 4290 of 4342 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
BacteremiaCausesPMC3698308

Displaying health effects 1 – 1 of 1 in total