Sphingobacterium spiritivorum D7529, F8081

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Sphingobacterium

Description

Sphingobacterium spiritivorum D7529 and F8081 are characterized as rod-shaped bacteria. They possess a single replicon, indicating that they have a straightforward genomic organization. The strain D7529 has been assigned the accession number CP068083.1, which provides a reference for its genetic information in biological databases. The genus Sphingobacterium is known for its capacity to thrive in various environments, often exhibiting versatility in nutrient utilization. This trait can contribute to their ecological roles, particularly in decomposing organic matter and participating in soil health. The rod shape of these bacteria is typical among many members of the Sphingobacterium genus and may play a role in their motility and colonization of substrates. In summary, Sphingobacterium spiritivorum D7529 and F8081, with their rod morphology and single replicon, exemplify the structural and genetic characteristics of their genus. Their ecological significance is enhanced by their potential contributions to nutrient cycling and soil ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSphingobacterium
SpeciesSphingobacterium spiritivorum
StrainD7529, F8081

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Sphingobacterium spiritivorum D7529, F8081
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobacterium spiritivorum D7529, F8081, Complete Genome

Gene Summary

Adenine Count

1556165 bp

Thymine Count

1549288 bp

Guanine Count

1019612 bp

Cytosine Count

1010237 bp

Genome Length

5135302 bp

Protein-coding Genes

4250 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunitI6J02_01245Q8KGA2Negative349222 - 35032240229.7
ywbe family proteinI6J02_01250P39588Negative350564 - 3507647206.7
rip metalloprotease rsepI6J02_01255O67776Negative350832 - 35215748646.3
1-deoxy-d-xylulose-5-phosphate reductoisomeraseI6J02_01260Q5L9P6Negative352186 - 35333742129.7
beta-carotene 15,15'-monooxygenaseI6J02_01265Not AvailableNegative353353 - 35413829572.4
dpp iv n-terminal domain-containing proteinI6J02_01270Q6F3I7Negative354302 - 35642581111.9
duf3276 family proteinI6J02_01275Not AvailableNegative356558 - 35689613403.5
hypothetical proteinI6J02_01280Not AvailablePositive357213 - 35805230656.0
histidine kinaseI6J02_01285Q8EQQ2Positive358064 - 35910740237.6
response regulatorI6J02_01290Q8EDD7Positive359100 - 35984328261.3

Displaying genes 271 – 280 of 4342 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
BacteremiaCausesPMC3698308

Displaying health effects 1 – 1 of 1 in total