Sphingobacterium spiritivorum D7529, F8081

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Sphingobacterium

Description

Sphingobacterium spiritivorum D7529 and F8081 are characterized as rod-shaped bacteria. They possess a single replicon, indicating that they have a straightforward genomic organization. The strain D7529 has been assigned the accession number CP068083.1, which provides a reference for its genetic information in biological databases. The genus Sphingobacterium is known for its capacity to thrive in various environments, often exhibiting versatility in nutrient utilization. This trait can contribute to their ecological roles, particularly in decomposing organic matter and participating in soil health. The rod shape of these bacteria is typical among many members of the Sphingobacterium genus and may play a role in their motility and colonization of substrates. In summary, Sphingobacterium spiritivorum D7529 and F8081, with their rod morphology and single replicon, exemplify the structural and genetic characteristics of their genus. Their ecological significance is enhanced by their potential contributions to nutrient cycling and soil ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSphingobacterium
SpeciesSphingobacterium spiritivorum
StrainD7529, F8081

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Sphingobacterium spiritivorum D7529, F8081
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobacterium spiritivorum D7529, F8081, Complete Genome

Gene Summary

Adenine Count

1556165 bp

Thymine Count

1549288 bp

Guanine Count

1019612 bp

Cytosine Count

1010237 bp

Genome Length

5135302 bp

Protein-coding Genes

4250 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
wg repeat-containing proteinI6J02_13770Not AvailableNegative3293488 - 329412923944.6
ragb/susd family nutrient uptake outer membrane proteinI6J02_13775T2KN63Negative3294471 - 329620164635.0
susc/raga family tonb-linked outer membrane proteinI6J02_13780T2KPJ3Negative3296238 - 3299363116442.0
glycoside hydrolase family 88 proteinI6J02_13785T2KLZ3Negative3299407 - 330068148989.3
duf2264 domain-containing proteinI6J02_13790Not AvailableNegative3300698 - 330195447579.6
hypothetical proteinI6J02_13795T2KMF4Positive3302167 - 330363656095.3
response regulatorI6J02_13800T2KMF4Positive3304170 - 330599370166.1
cpbp family intramembrane metalloproteaseI6J02_13805Not AvailableNegative3306069 - 330685429239.6
Trna-serNot AvailableNot AvailablePositive3306949 - 3307036Not Available
m13 family metallopeptidaseI6J02_13815Q8IS64Positive3307177 - 330922277244.6

Displaying genes 2761 – 2770 of 4342 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
BacteremiaCausesPMC3698308

Displaying health effects 1 – 1 of 1 in total