Sphingobacterium spiritivorum D7529, F8081

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Sphingobacterium

Description

Sphingobacterium spiritivorum D7529 and F8081 are characterized as rod-shaped bacteria. They possess a single replicon, indicating that they have a straightforward genomic organization. The strain D7529 has been assigned the accession number CP068083.1, which provides a reference for its genetic information in biological databases. The genus Sphingobacterium is known for its capacity to thrive in various environments, often exhibiting versatility in nutrient utilization. This trait can contribute to their ecological roles, particularly in decomposing organic matter and participating in soil health. The rod shape of these bacteria is typical among many members of the Sphingobacterium genus and may play a role in their motility and colonization of substrates. In summary, Sphingobacterium spiritivorum D7529 and F8081, with their rod morphology and single replicon, exemplify the structural and genetic characteristics of their genus. Their ecological significance is enhanced by their potential contributions to nutrient cycling and soil ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSphingobacterium
SpeciesSphingobacterium spiritivorum
StrainD7529, F8081

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Sphingobacterium spiritivorum D7529, F8081
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobacterium spiritivorum D7529, F8081, Complete Genome

Gene Summary

Adenine Count

1556165 bp

Thymine Count

1549288 bp

Guanine Count

1019612 bp

Cytosine Count

1010237 bp

Genome Length

5135302 bp

Protein-coding Genes

4250 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
yihy/virulence factor brkb family proteinI6J02_11220O34437Negative2726161 - 272712936515.3
acyl-coa thioesteraseI6J02_11225Q45061Negative2727129 - 272753915918.5
endolytic transglycosylase mltgI6J02_11230P44720Negative2727549 - 272859240359.6
pasta domain-containing proteinI6J02_11235Q8R9T6Negative2728604 - 272936227452.4
d-alanine--d-alanine ligaseI6J02_11240Q5LI31Positive2729525 - 273052937348.6
serine hydrolaseI6J02_11245Not AvailableNegative2730604 - 273185448941.1
deoxyribodipyrimidine photo-lyaseI6J02_11250Q55081Negative2731919 - 273323251320.9
dihydrofolate reductaseI6J02_11255Q54277Negative2733238 - 273373219019.6
thymidylate synthaseI6J02_11260Q11VK5Negative2733821 - 273464231239.5
trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtabI6J02_11265P54462Positive2734753 - 273607549604.4

Displaying genes 2251 – 2260 of 4342 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
BacteremiaCausesPMC3698308

Displaying health effects 1 – 1 of 1 in total