Planctopirus ephydatiae spb1

Gram-negativeCocciMotile

Kingdom

Pseudomonadati

Phylum

Planctomycetota

Class

Planctomycetia

Order

Planctomycetales

Family

Planctomycetaceae

Genus

Planctopirus

Description

Planctopirus ephydatiae spb1 is a Gram-negative cocci bacterium notable for its unique morphological and genetic characteristics. This species possesses flagella, which suggests that it has the capability for motility, an important trait for its ecological interactions. Genetically, Planctopirus ephydatiae spb1 contains a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and survival in various environments. The genetic information for this organism can be accessed through the accession number CP036299.1, which provides a resource for further research and analysis. The combination of its Gram-negative classification and cocci shape may influence its role in microbial communities, particularly in aquatic environments where it likely serves as a participant in nutrient cycling and organic matter decomposition. The presence of flagella enables it to navigate its environment, which could facilitate interactions with other microorganisms and contribute to its ecological niche. In summary, Planctopirus ephydatiae spb1 exemplifies a bacterium with specific traits that enhance its adaptability and ecological functionality. Understanding its characteristics can provide insights into the dynamics of microbial communities, particularly in freshwater ecosystems where it may play a significant role in maintaining ecological balance.

Taxonomy

KingdomPseudomonadati
PhylumPlanctomycetota
ClassPlanctomycetia
OrderPlanctomycetales
FamilyPlanctomycetaceae
GenusPlanctopirus
SpeciesPlanctopirus ephydatiae
Strainspb1

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Planctopirus ephydatiae spb1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature30
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Planctopirus ephydatiae spb1, Complete Genome

Gene Summary

Adenine Count

1212758 bp

Thymine Count

1196667 bp

Guanine Count

1393894 bp

Cytosine Count

1410742 bp

Genome Length

5214061 bp

Protein-coding Genes

4038 genes

Non-Coding Genes

72 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSpb1_30570P0DPD4Negative3844003 - 38442609153.14
50s ribosomal protein l28Spb1_30580B8CWU5Positive3844801 - 38450619430.78
glutamyl-trna(gln) amidotransferase subunit cSpb1_30590Q8RC41Positive3845280 - 384560011649.2
glutamyl-trna(gln) amidotransferase subunit aSpb1_30600B4UIV1Positive3845697 - 384720253032.9
aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit bSpb1_30610Q7UK56Positive3847288 - 384880556537.6
hypothetical proteinSpb1_30620Not AvailablePositive3848925 - 384988434556.6
aconitate hydratase precursorSpb1_30630Q9RTN7Positive3850146 - 385281895950.7
protoporphyrinogen oxidaseSpb1_30640P32397Negative3852895 - 385442455334.1
uroporphyrinogen decarboxylaseSpb1_30650A9FZW7Negative3854469 - 385551238656.8
bifunctional uroporphyrinogen-iii synthetase/response regulator domain proteinSpb1_30660O34394Negative3855651 - 385654133145.1

Displaying genes 3041 – 3050 of 4110 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.