Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus ephydatiae |
| Strain | spb1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 30 |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1212758 bp
Thymine Count
1196667 bp
Guanine Count
1393894 bp
Cytosine Count
1410742 bp
Genome Length
5214061 bp
Protein-coding Genes
4038 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease | Spb1_19970 | Q5SLP1 | Positive | 2460423 - 2461820 | 51755.1 |
| glutamine--fructose-6-phosphate aminotransferase | Spb1_19980 | Q8KG38 | Negative | 2461917 - 2463779 | 68308.0 |
| udp-glucose 4-epimerase | Spb1_19990 | Q57664 | Negative | 2463950 - 2464918 | 34501.1 |
| hypothetical protein | Spb1_20000 | Not Available | Positive | 2465657 - 2465995 | 12661.0 |
| autoinducer 2 sensor kinase/phosphatase luxq | Spb1_20010 | P0AEC7 | Negative | 2466017 - 2468428 | 88721.5 |
| queuine trna-ribosyltransferase | Spb1_20020 | Q7UWK9 | Positive | 2468719 - 2469843 | 41096.9 |
| preprotein translocase subunit yajc | Spb1_20030 | O32052 | Positive | 2470076 - 2470447 | 13448.6 |
| bifunctional preprotein translocase subunit secd/secf | Spb1_20040 | Q2YNM0 | Positive | 2470685 - 2473678 | 107747.0 |
| branched-chain alpha-keto acid dehydrogenase subunit e2 | Spb1_20050 | Not Available | Positive | 2473860 - 2474147 | 10128.1 |
| dna polymerase iii subunit tau | Spb1_20060 | P52024 | Positive | 2474162 - 2475259 | 40512.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
