Rhodoferax aquaticus

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Rhodoferax

Description

Rhodoferax aquaticus is a Gram-negative bacterium characterized by its rod-shaped morphology. It possesses a single flagellum, which aids in its motility. This species has one replicon, indicating that it contains a single circular chromosome. The genomic information for Rhodoferax aquaticus can be accessed through the accession number CP036282.1. As a member of the microbial community, Rhodoferax aquaticus likely plays a role in the biogeochemical cycling of elements within aquatic environments. Its Gram-negative nature suggests it has a complex cell wall structure, which can impact its interactions with other microorganisms and its ability to adapt to various ecological niches. The presence of flagella may enhance its capacity to navigate through different aquatic habitats, potentially influencing its ecological functions, such as nutrient cycling and organic matter decomposition. Understanding the traits of Rhodoferax aquaticus provides insight into its ecological significance and potential applications in environmental microbiology, particularly in the management of water quality and bioremediation processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusRhodoferax
SpeciesRhodoferax aquaticus
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhodoferax aquaticus
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoferax aquaticus , Complete Genome

Gene Summary

Adenine Count

1004982 bp

Thymine Count

1011834 bp

Guanine Count

1360438 bp

Cytosine Count

1360436 bp

Genome Length

4737690 bp

Protein-coding Genes

4184 genes

Non-Coding Genes

184 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aromatic ring-hydroxylating dioxygenase subunit alphaEXZ61_17770P0ABR8Positive3856082 - 385734447211.1
hybrid-cluster nad(p)-dependent oxidoreductaseEXZ61_17775P9WJ92Positive3857357 - 385846339598.4
hypothetical proteinEXZ61_17780Not AvailablePositive3858480 - 38586747230.94
atp-binding cassette domain-containing proteinEXZ61_17785E0SCY1Positive3858693 - 385973038013.2
proline/glycine betaine abc transporter permeaseEXZ61_17790P14176Positive3859723 - 386059530747.5
glxa family transcriptional regulatorEXZ61_17795A0A0H2ZIC3Positive3860725 - 386170836223.7
choline abc transporter substrate-binding proteinEXZ61_17800Q9L4K3Positive3861982 - 386292333607.1
formyltetrahydrofolate deformylaseEXZ61_17805Q46339Positive3863045 - 386390532030.5
betaine-aldehyde dehydrogenaseEXZ61_17810Q13NG6Positive3863929 - 386538951603.0
choline dehydrogenaseEXZ61_17815Q6UPE0Positive3865396 - 386706660780.5

Displaying genes 3611 – 3620 of 4368 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.