Rhodoferax aquaticus

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Rhodoferax

Description

Rhodoferax aquaticus is a Gram-negative bacterium characterized by its rod-shaped morphology. It possesses a single flagellum, which aids in its motility. This species has one replicon, indicating that it contains a single circular chromosome. The genomic information for Rhodoferax aquaticus can be accessed through the accession number CP036282.1. As a member of the microbial community, Rhodoferax aquaticus likely plays a role in the biogeochemical cycling of elements within aquatic environments. Its Gram-negative nature suggests it has a complex cell wall structure, which can impact its interactions with other microorganisms and its ability to adapt to various ecological niches. The presence of flagella may enhance its capacity to navigate through different aquatic habitats, potentially influencing its ecological functions, such as nutrient cycling and organic matter decomposition. Understanding the traits of Rhodoferax aquaticus provides insight into its ecological significance and potential applications in environmental microbiology, particularly in the management of water quality and bioremediation processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusRhodoferax
SpeciesRhodoferax aquaticus
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhodoferax aquaticus
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoferax aquaticus , Complete Genome

Gene Summary

Adenine Count

1004982 bp

Thymine Count

1011834 bp

Guanine Count

1360438 bp

Cytosine Count

1360436 bp

Genome Length

4737690 bp

Protein-coding Genes

4184 genes

Non-Coding Genes

184 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2fe-2s iron-sulfur cluster binding domain-containing proteinEXZ61_16220P0A3D2Positive3520530 - 352082910747.8
amp-binding acetyl-coa synthetaseEXZ61_16225Q7TYX8Positive3520939 - 352262761497.6
bifunctional udp-sugar hydrolase/5'-nucleotidaseEXZ61_16230P07024Positive3522840 - 352447759043.7
pas domain-containing sensor histidine kinaseEXZ61_16235P0DOA0Positive3524535 - 352673980314.7
rlua family pseudouridine synthaseEXZ61_16240Q9CK02Positive3526729 - 352741825429.6
php domain-containing proteinEXZ61_16245Q7NXD4Positive3527456 - 352831030400.8
threonylcarbamoyl-amp synthaseEXZ61_16250P0AFR5Positive3528346 - 352896922641.3
site-2 protease family proteinEXZ61_16255P70995Positive3529018 - 352968624273.5
tryptophan--trna ligaseEXZ61_16260Q8PFH5Positive3529701 - 353100847331.2
lytic transglycosylase domain-containing proteinEXZ61_16265B8F6F0Negative3531013 - 353165724118.3

Displaying genes 3301 – 3310 of 4368 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.