Rhodoferax aquaticus

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Rhodoferax

Description

Rhodoferax aquaticus is a Gram-negative bacterium characterized by its rod-shaped morphology. It possesses a single flagellum, which aids in its motility. This species has one replicon, indicating that it contains a single circular chromosome. The genomic information for Rhodoferax aquaticus can be accessed through the accession number CP036282.1. As a member of the microbial community, Rhodoferax aquaticus likely plays a role in the biogeochemical cycling of elements within aquatic environments. Its Gram-negative nature suggests it has a complex cell wall structure, which can impact its interactions with other microorganisms and its ability to adapt to various ecological niches. The presence of flagella may enhance its capacity to navigate through different aquatic habitats, potentially influencing its ecological functions, such as nutrient cycling and organic matter decomposition. Understanding the traits of Rhodoferax aquaticus provides insight into its ecological significance and potential applications in environmental microbiology, particularly in the management of water quality and bioremediation processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusRhodoferax
SpeciesRhodoferax aquaticus
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhodoferax aquaticus
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoferax aquaticus , Complete Genome

Gene Summary

Adenine Count

1004982 bp

Thymine Count

1011834 bp

Guanine Count

1360438 bp

Cytosine Count

1360436 bp

Genome Length

4737690 bp

Protein-coding Genes

4184 genes

Non-Coding Genes

184 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphatase pap2 family proteinEXZ61_15770A0Q4N6Positive3424817 - 342551826183.2
sdr family oxidoreductaseEXZ61_15775Not AvailableNegative3425523 - 342645834363.6
cdp-6-deoxy-delta-3,4-glucoseen reductaseEXZ61_15780Q66DP5Positive3426513 - 342756538488.9
dmt family transporterEXZ61_15785O29470Negative3427586 - 342845830711.3
abc transporter atp-binding proteinEXZ61_15790P21630Negative3428502 - 342922125841.9
abc transporter atp-binding proteinEXZ61_15795P21629Negative3429230 - 343000027771.8
abc transporter atp-binding proteinEXZ61_15800P21628Negative3430025 - 343110738684.6
branched-chain amino acid abc transporter permeaseEXZ61_15805P21627Negative3431123 - 343205232432.2
alpha-ketoglutarate dehydrogenaseEXZ61_15810Q59097Negative3432307 - 343496796691.3
lrp/asnc family transcriptional regulatorEXZ61_15815P42179Positive3435073 - 343554017103.8

Displaying genes 3211 – 3220 of 4368 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.